Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
MSH4O15457 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.76□□□□□ -1.81
MSH4O15457 AC024341.1-201ENST00000526444 1552 ntBASIC3.76□□□□□ -1.81
MSH4O15457 TNPO1P3-201ENST00000436471 2662 ntBASIC3.76□□□□□ -1.81
MSH4O15457 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.76□□□□□ -1.81
MSH4O15457 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MSH4O15457 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MSH4O15457 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MSH4O15457 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.75□□□□□ -1.81
MSH4O15457 MIR30E-201ENST00000362104 92 ntBASIC3.75□□□□□ -1.81
MSH4O15457 RNU1-70P-201ENST00000362618 164 ntBASIC3.75□□□□□ -1.81
MSH4O15457 OR52E6-202ENST00000379946 954 ntBASIC3.75□□□□□ -1.81
MSH4O15457 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
MSH4O15457 SNORA11.1-201ENST00000408133 129 ntBASIC3.75□□□□□ -1.81
MSH4O15457 AC063979.1-201ENST00000415539 377 ntBASIC3.75□□□□□ -1.81
MSH4O15457 AL356968.1-201ENST00000416622 474 ntBASIC3.75□□□□□ -1.81
MSH4O15457 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH4O15457 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH4O15457 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH4O15457 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.75□□□□□ -1.81
MSH4O15457 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH4O15457 Z75741.1-201ENST00000446793 314 ntBASIC3.75□□□□□ -1.81
MSH4O15457 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.75□□□□□ -1.81
MSH4O15457 MRPS31P2-201ENST00000451581 518 ntBASIC3.75□□□□□ -1.81
MSH4O15457 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH4O15457 RPL23AP67-201ENST00000465341 474 ntBASIC3.75□□□□□ -1.81
MSH4O15457 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH4O15457 APOOP4-201ENST00000513530 597 ntBASIC3.75□□□□□ -1.81
MSH4O15457 RN7SKP116-201ENST00000516902 319 ntBASIC3.75□□□□□ -1.81
MSH4O15457 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.75□□□□□ -1.81
MSH4O15457 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
MSH4O15457 AC139103.1-201ENST00000534696 1030 ntBASIC3.75□□□□□ -1.81
MSH4O15457 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.75□□□□□ -1.81
MSH4O15457 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.75□□□□□ -1.81
MSH4O15457 TGIF1P1-201ENST00000558095 802 ntBASIC3.75□□□□□ -1.81
MSH4O15457 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH4O15457 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH4O15457 AC125494.3-201ENST00000602759 455 ntBASIC3.75□□□□□ -1.81
MSH4O15457 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH4O15457 AC110741.2-201ENST00000605278 268 ntBASIC3.75□□□□□ -1.81
MSH4O15457 AC096577.2-201ENST00000611455 153 ntBASIC3.75□□□□□ -1.81
MSH4O15457 STMN1P1-201ENST00000617809 440 ntBASIC3.75□□□□□ -1.81
MSH4O15457 AC110801.1-201ENST00000623590 212 ntBASIC3.75□□□□□ -1.81
MSH4O15457 AC073592.7-201ENST00000623659 507 ntBASIC3.75□□□□□ -1.81
MSH4O15457 AL356094.1-201ENST00000624663 1212 ntBASIC3.75□□□□□ -1.81
MSH4O15457 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MSH4O15457 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.75□□□□□ -1.81
MSH4O15457 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MSH4O15457 AL133412.1-201ENST00000380194 2992 ntBASIC3.75□□□□□ -1.81
MSH4O15457 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH4O15457 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH4O15457 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH4O15457 AC090229.1-201ENST00000590983 1609 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC017071.1-201ENST00000564407 2204 ntBASIC3.74□□□□□ -1.81
MSH4O15457 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
MSH4O15457 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH4O15457 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH4O15457 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
MSH4O15457 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
MSH4O15457 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
MSH4O15457 RNA5SP27-201ENST00000363839 119 ntBASIC3.74□□□□□ -1.81
MSH4O15457 RNU6-761P-201ENST00000384148 107 ntBASIC3.74□□□□□ -1.81
MSH4O15457 RPL30P2-201ENST00000414021 291 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH4O15457 AL513174.1-201ENST00000423182 629 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH4O15457 RPL23AP82-202ENST00000427528 469 ntBASIC3.74□□□□□ -1.81
MSH4O15457 ETF1P3-201ENST00000430422 1160 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC023347.2-201ENST00000433994 462 ntBASIC3.74□□□□□ -1.81
MSH4O15457 CENPBD1P1-201ENST00000464061 469 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC021205.2-201ENST00000480069 347 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC008565.1-201ENST00000509046 885 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC110792.2-201ENST00000510278 224 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH4O15457 AC010306.1-201ENST00000523223 1117 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH4O15457 AC083923.1-201ENST00000523708 376 ntBASIC3.74□□□□□ -1.81
MSH4O15457 C1DP5-201ENST00000525775 383 ntBASIC3.74□□□□□ -1.81
MSH4O15457 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.74□□□□□ -1.81
MSH4O15457 RFPL1S-203ENST00000539579 330 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH4O15457 AC027104.1-201ENST00000563702 681 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH4O15457 ZNF415P1-201ENST00000582279 1166 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH4O15457 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH4O15457 AC010680.3-201ENST00000604215 520 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC009464.1-201ENST00000615731 469 ntBASIC3.74□□□□□ -1.81
MSH4O15457 MIR7112-201ENST00000616126 65 ntBASIC3.74□□□□□ -1.81
MSH4O15457 RMST_10.1-201ENST00000616309 154 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
MSH4O15457 AL163051.2-201ENST00000618976 735 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC024595.1-201ENST00000623088 387 ntBASIC3.74□□□□□ -1.81
MSH4O15457 AC020923.1-201ENST00000624021 917 ntBASIC3.74□□□□□ -1.81
MSH4O15457 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH4O15457 AC008725.1-201ENST00000605123 2263 ntBASIC3.74□□□□□ -1.81
MSH4O15457 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
MSH4O15457 MTND5P1-201ENST00000445440 1375 ntBASIC3.74□□□□□ -1.81
MSH4O15457 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.74□□□□□ -1.81
MSH4O15457 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms