Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM1O15116 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.47□□□□□ -1.85
LSM1O15116 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM1O15116 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.47□□□□□ -1.85
LSM1O15116 AP000926.4-201ENST00000527351 454 ntBASIC3.47□□□□□ -1.85
LSM1O15116 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM1O15116 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.47□□□□□ -1.85
LSM1O15116 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM1O15116 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM1O15116 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM1O15116 MTCYBP28-201ENST00000566728 1132 ntBASIC3.47□□□□□ -1.85
LSM1O15116 AC136624.4-201ENST00000573044 370 ntBASIC3.47□□□□□ -1.85
LSM1O15116 MIR3690-201ENST00000580266 75 ntBASIC3.47□□□□□ -1.85
LSM1O15116 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
LSM1O15116 AC053481.4-201ENST00000583164 216 ntBASIC3.47□□□□□ -1.85
LSM1O15116 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM1O15116 AC019176.2-201ENST00000611579 315 ntBASIC3.47□□□□□ -1.85
LSM1O15116 AC104307.1-201ENST00000616142 196 ntBASIC3.47□□□□□ -1.85
LSM1O15116 AC092608.3-201ENST00000625017 386 ntBASIC3.47□□□□□ -1.85
LSM1O15116 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
LSM1O15116 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM1O15116 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM1O15116 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LSM1O15116 AC068647.1-201ENST00000489539 2265 ntBASIC3.46□□□□□ -1.85
LSM1O15116 AC016716.1-201ENST00000265882 708 ntBASIC3.46□□□□□ -1.86
LSM1O15116 SNORA70.2-201ENST00000364506 135 ntBASIC3.46□□□□□ -1.86
LSM1O15116 SNORA51.2-201ENST00000364595 132 ntBASIC3.46□□□□□ -1.86
LSM1O15116 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
LSM1O15116 NDUFB4P5-201ENST00000415445 361 ntBASIC3.46□□□□□ -1.86
LSM1O15116 MTCYBP24-201ENST00000420387 1106 ntBASIC3.46□□□□□ -1.86
LSM1O15116 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.46□□□□□ -1.86
LSM1O15116 MRPS18BP2-201ENST00000434310 759 ntBASIC3.46□□□□□ -1.86
LSM1O15116 HMGB1P12-201ENST00000438594 598 ntBASIC3.46□□□□□ -1.86
LSM1O15116 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
LSM1O15116 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.46□□□□□ -1.86
LSM1O15116 RPL23AP15-201ENST00000450202 459 ntBASIC3.46□□□□□ -1.86
LSM1O15116 AC233982.1-201ENST00000451247 436 ntBASIC3.46□□□□□ -1.86
LSM1O15116 VN1R105P-201ENST00000486595 910 ntBASIC3.46□□□□□ -1.86
LSM1O15116 AC006483.1-201ENST00000487308 313 ntBASIC3.46□□□□□ -1.86
LSM1O15116 HMGB1P38-201ENST00000490557 577 ntBASIC3.46□□□□□ -1.86
LSM1O15116 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
LSM1O15116 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.46□□□□□ -1.86
LSM1O15116 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.46□□□□□ -1.86
LSM1O15116 AC093853.1-201ENST00000515689 483 ntBASIC3.46□□□□□ -1.86
LSM1O15116 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.46□□□□□ -1.86
LSM1O15116 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.46□□□□□ -1.86
LSM1O15116 AP003717.3-201ENST00000544832 1180 ntBASIC3.46□□□□□ -1.86
LSM1O15116 EIF5A2P1-201ENST00000564027 460 ntBASIC3.46□□□□□ -1.86
LSM1O15116 RN7SL703P-201ENST00000578485 302 ntBASIC3.46□□□□□ -1.86
LSM1O15116 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.46□□□□□ -1.86
LSM1O15116 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LSM1O15116 AC006077.1-201ENST00000604746 343 ntBASIC3.46□□□□□ -1.86
LSM1O15116 AC100814.1-201ENST00000606963 623 ntBASIC3.46□□□□□ -1.86
LSM1O15116 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.46□□□□□ -1.86
LSM1O15116 AC004832.5-201ENST00000608677 401 ntBASIC3.46□□□□□ -1.86
LSM1O15116 MIR1264-201ENST00000616374 69 ntBASIC3.46□□□□□ -1.86
LSM1O15116 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LSM1O15116 ELL2P4-201ENST00000446870 1376 ntBASIC3.46□□□□□ -1.86
LSM1O15116 ZNF37BP-203ENST00000452306 1352 ntBASIC3.46□□□□□ -1.86
LSM1O15116 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LSM1O15116 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.46□□□□□ -1.86
LSM1O15116 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
LSM1O15116 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LSM1O15116 MTCO1P18-201ENST00000455518 1419 ntBASIC3.45□□□□□ -1.86
LSM1O15116 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.45□□□□□ -1.86
LSM1O15116 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
LSM1O15116 SEC63P2-201ENST00000503863 1939 ntBASIC3.45□□□□□ -1.86
LSM1O15116 RNU1-75P-201ENST00000347264 129 ntBASIC3.45□□□□□ -1.86
LSM1O15116 RNU6-335P-201ENST00000364563 113 ntBASIC3.45□□□□□ -1.86
LSM1O15116 RNU6-1005P-201ENST00000384519 107 ntBASIC3.45□□□□□ -1.86
LSM1O15116 DSTNP4-201ENST00000399472 474 ntBASIC3.45□□□□□ -1.86
LSM1O15116 SKINT1L-201ENST00000401057 817 ntBASIC3.45□□□□□ -1.86
LSM1O15116 RPL23AP47-201ENST00000408017 460 ntBASIC3.45□□□□□ -1.86
LSM1O15116 TOMM22P1-201ENST00000418578 312 ntBASIC3.45□□□□□ -1.86
LSM1O15116 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.45□□□□□ -1.86
LSM1O15116 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LSM1O15116 AC245054.1-201ENST00000420944 258 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.45□□□□□ -1.86
LSM1O15116 RSL24D1P6-201ENST00000426934 401 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AL158071.1-201ENST00000430315 461 ntBASIC3.45□□□□□ -1.86
LSM1O15116 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.45□□□□□ -1.86
LSM1O15116 B3GNT2P1-201ENST00000434960 952 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AC009969.1-201ENST00000438726 172 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AL513321.1-201ENST00000441175 761 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.45□□□□□ -1.86
LSM1O15116 RN7SL385P-201ENST00000468873 276 ntBASIC3.45□□□□□ -1.86
LSM1O15116 VN1R17P-201ENST00000472048 1090 ntBASIC3.45□□□□□ -1.86
LSM1O15116 RPS26P21-201ENST00000475397 348 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AC025181.1-201ENST00000477507 416 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.45□□□□□ -1.86
LSM1O15116 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.45□□□□□ -1.86
LSM1O15116 AC133963.2-201ENST00000513686 578 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AC007991.1-201ENST00000522680 631 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AF279873.1-201ENST00000523393 313 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.45□□□□□ -1.86
LSM1O15116 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.45□□□□□ -1.86
LSM1O15116 AL163153.1-201ENST00000554223 283 ntBASIC3.45□□□□□ -1.86
LSM1O15116 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LSM1O15116 BNIP3P38-201ENST00000601117 544 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AC091488.1-201ENST00000604239 660 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms