Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.1□□□□□ -1.91
UPK1AO00322 RPL31P45-201ENST00000419532 356 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC012065.2-201ENST00000421295 375 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC023347.2-201ENST00000433994 462 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC009969.1-201ENST00000438726 172 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 ATP5C1P1-201ENST00000441945 895 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.1□□□□□ -1.91
UPK1AO00322 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.1□□□□□ -1.91
UPK1AO00322 AC092451.1-201ENST00000480211 153 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 RN7SL293P-201ENST00000481765 281 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
UPK1AO00322 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC118282.1-201ENST00000506408 765 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC110792.2-201ENST00000510278 224 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC119751.1-201ENST00000513357 765 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 APOOP4-201ENST00000513530 597 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 RNA5SP217-201ENST00000515959 91 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 RN7SKP157-201ENST00000516174 282 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.1□□□□□ -1.91
UPK1AO00322 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.1□□□□□ -1.91
UPK1AO00322 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.1□□□□□ -1.91
UPK1AO00322 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.1□□□□□ -1.91
UPK1AO00322 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.1□□□□□ -1.91
UPK1AO00322 AC245389.1-201ENST00000605141 529 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC107294.3-201ENST00000609211 526 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 uc_338.1-201ENST00000612113 180 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC245389.2-201ENST00000616023 576 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AL355365.1-201ENST00000616480 294 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC243756.2-201ENST00000618406 463 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AC242843.1-201ENST00000618702 573 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 XIST_intron.1-201ENST00000619444 68 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 SNORD39.4-201ENST00000620099 78 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.1□□□□□ -1.91
UPK1AO00322 AL049781.1-201ENST00000623195 3585 ntBASIC3.1□□□□□ -1.91
UPK1AO00322 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
UPK1AO00322 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
UPK1AO00322 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
UPK1AO00322 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UPK1AO00322 OR6K3-202ENST00000368146 996 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.09□□□□□ -1.91
UPK1AO00322 MIR142-201ENST00000384835 87 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 ATP5F1P3-201ENST00000397213 657 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 Z86062.1-201ENST00000406773 777 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.09□□□□□ -1.91
UPK1AO00322 AC012498.1-201ENST00000424037 437 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 RPL37P1-201ENST00000432310 284 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.09□□□□□ -1.91
UPK1AO00322 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.09□□□□□ -1.91
UPK1AO00322 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.09□□□□□ -1.91
UPK1AO00322 AC115115.1-201ENST00000449927 248 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 TVP23BP2-201ENST00000455082 615 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 SNORD108-201ENST00000459332 71 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 RN7SL75P-201ENST00000461926 281 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 SNRPGP3-201ENST00000469405 227 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UPK1AO00322 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.09□□□□□ -1.91
UPK1AO00322 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.09□□□□□ -1.91
UPK1AO00322 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.09□□□□□ -1.91
UPK1AO00322 MIR4276-201ENST00000584832 70 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.09□□□□□ -1.91
UPK1AO00322 AC245128.3-201ENST00000594721 748 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 LLPHP1-201ENST00000603571 367 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 AC009032.1-201ENST00000617574 431 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.09□□□□□ -1.91
UPK1AO00322 AL122126.1-201ENST00000546905 1318 ntBASIC3.09□□□□□ -1.91
UPK1AO00322 AL021368.2-201ENST00000606125 5352 ntBASIC3.09□□□□□ -1.92
UPK1AO00322 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
UPK1AO00322 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.09□□□□□ -1.92
UPK1AO00322 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
UPK1AO00322 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
UPK1AO00322 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPK1AO00322 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
UPK1AO00322 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1AO00322 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPK1AO00322 MTND5P24-201ENST00000438892 1767 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 AC000367.1-201ENST00000452711 1766 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK1AO00322 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK1AO00322 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UPK1AO00322 RNA5SP391-201ENST00000363456 119 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 RNA5SP167-201ENST00000365461 116 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 HMGB1P13-201ENST00000406019 642 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 RNA5SP229-201ENST00000410809 99 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 AC010385.1-201ENST00000412374 256 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 PRELID3BP11-201ENST00000414230 479 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 MTCO3P4-201ENST00000419236 787 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 AC008065.1-201ENST00000428525 348 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1AO00322 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK1AO00322 Z99127.3-201ENST00000448158 395 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.08□□□□□ -1.92
UPK1AO00322 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1AO00322 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1AO00322 AC096992.1-201ENST00000459808 709 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 RPL7P38-201ENST00000488396 739 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms