Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 GTF2IP23-201ENST00000423746 351 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL645931.1-201ENST00000439737 410 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 SNX5P1-201ENST00000505757 1041 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 HIGD1AP18-201ENST00000520730 278 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL136520.1-202ENST00000555494 763 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 TGIF1P1-201ENST00000558095 802 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC233266.2-201ENST00000567067 528 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 MTND4LP25-201ENST00000570218 163 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC011471.1-201ENST00000585766 187 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 ZNF92P2-201ENST00000600543 1059 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC253576.2-201ENST00000618815 580 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AP003400.6-201ENST00000624698 740 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 NMD3P1-201ENST00000439704 1488 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC058791.1-201ENST00000608412 3198 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC005183.1-201ENST00000603687 1979 ntBASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL118496.1-201ENST00000440201 1812 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 U3.15-201ENST00000365398 212 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 OR6K3-202ENST00000368146 996 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC069218.2-201ENST00000411665 344 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC010385.1-201ENST00000412374 256 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 RPL26P28-201ENST00000451325 435 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 U3.44-201ENST00000458938 192 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 RPL23AP73-201ENST00000492507 471 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 HAUS1P1-201ENST00000505275 832 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC027338.1-201ENST00000514840 825 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC006518.1-201ENST00000541449 943 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC079880.2-201ENST00000603790 1213 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 YPEL5P2-201ENST00000605553 359 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL136370.1-201ENST00000608166 691 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL445493.3-201ENST00000619568 477 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC097460.3-201ENST00000623099 442 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 Z83843.1-201ENST00000604070 3685 ntBASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMX2-CTNND1H3BSU7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 SNORD17-201ENST00000390930 237 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 SNORA11C-201ENST00000408532 129 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNU4-74P-201ENST00000411280 161 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 GLRXP1-201ENST00000423261 334 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 UBE2V1P1-201ENST00000430836 445 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL513321.1-201ENST00000441175 761 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 RPL23AP62-201ENST00000463396 453 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC008155.2-201ENST00000464337 397 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC025518.1-201ENST00000479856 347 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC110794.1-201ENST00000505816 425 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC008628.1-201ENST00000508663 265 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 FCF1P8-201ENST00000510322 597 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC023141.12-201ENST00000512399 199 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNU6-1308P-201ENST00000516817 103 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC004923.2-201ENST00000529649 369 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 OR4R2P-201ENST00000530815 597 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms