Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC022790.1-201ENST00000522872 204 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AF129408.1-201ENST00000608767 431 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 U1.23-201ENST00000610293 146 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 VN1R9P-201ENST00000614184 867 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 RNU1-68P-201ENST00000615382 146 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 RMST_10.1-201ENST00000616309 154 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 U1.39-201ENST00000621562 146 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC073476.4-201ENST00000628409 72 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 MTND4P9-201ENST00000507819 1346 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 SRP72P2-201ENST00000344851 1979 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 MTCO1P4-201ENST00000520516 1409 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC138393.1-206ENST00000540997 1886 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AP000568.1-201ENST00000282964 442 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 RNU6-354P-201ENST00000383862 107 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 RNU6-610P-201ENST00000384264 107 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 MTCO3P31-201ENST00000405526 789 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 LINC01347-201ENST00000417964 355 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AIMP1P1-201ENST00000418670 937 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC006960.1-201ENST00000419980 153 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC005189.1-201ENST00000431286 310 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 USP9YP7-201ENST00000436723 430 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AL353093.1-201ENST00000441292 436 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 RPS26P30-201ENST00000443431 335 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 USP9YP32-201ENST00000452432 430 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 RNA5SP309-201ENST00000516670 106 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC068657.1-201ENST00000520807 306 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 OR4R3P-201ENST00000525084 838 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC006130.2-201ENST00000586202 326 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 BNIP3P27-201ENST00000599991 412 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC068620.3-201ENST00000602749 560 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC006557.5-201ENST00000603126 811 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC015849.2-201ENST00000605738 409 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC112503.1-201ENST00000608436 391 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC084824.4-201ENST00000620106 731 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC010872.1-201ENST00000624225 675 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AP003072.4-201ENST00000624580 310 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC004808.1-201ENST00000627671 721 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 ELL2P4-201ENST00000446870 1376 ntBASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49D1C9J1S8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 MIR320B1-201ENST00000390209 79 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 RNA5SP44-201ENST00000410446 133 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 MTCO1P52-201ENST00000433928 531 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC073387.1-201ENST00000453261 709 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 MTND4LP31-201ENST00000514859 294 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 RN7SKP18-201ENST00000516005 275 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 SNORA19.3-201ENST00000516165 130 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms