Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 COX6CP12-201ENST00000446748 202 ntBASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AL034418.1-201ENST00000448675 860 ntBASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 MTND2P33-201ENST00000506452 1031 ntBASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 RPL23AP53-201ENST00000521854 457 ntBASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 OR5AK1P-201ENST00000524837 922 ntBASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 OR6C7P-201ENST00000547875 934 ntBASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AP005119.2-201ENST00000579735 1105 ntBASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 VN1R92P-201ENST00000598511 928 ntBASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 AC073091.2-201ENST00000603205 907 ntBASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.41□□□□□ -1.54
CTDP1Q9Y5B0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 OR56B2P-202ENST00000641377 2453 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 OR10J6P-201ENST00000289731 930 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 RNU6-660P-201ENST00000364566 109 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AL590762.2-201ENST00000395798 571 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 CYCSP45-201ENST00000402289 315 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AL596276.1-201ENST00000434465 418 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC091862.1-201ENST00000438016 1100 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AL592447.1-201ENST00000447592 540 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC027673.1-201ENST00000456245 405 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC025164.1-201ENST00000496249 478 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC015795.1-201ENST00000513669 327 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 RN7SKP31-201ENST00000516354 278 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC005868.1-201ENST00000536421 331 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 PARP1P2-201ENST00000556806 195 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AL356218.2-201ENST00000605264 187 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC007684.1-201ENST00000609671 477 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 AC073348.1-201ENST00000623002 331 ntBASIC5.4□□□□□ -1.54
CTDP1Q9Y5B0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 AC139713.2-215ENST00000641428 5037 ntBASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 NEAT1-202ENST00000501122 22743 ntBASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTDP1Q9Y5B0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 OR51H2P-202ENST00000641424 3046 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 Y_RNA.248-201ENST00000364501 109 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 Y_RNA.302-201ENST00000364997 102 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 MIR217-201ENST00000384817 110 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 RNU6-1300P-201ENST00000391046 108 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 U3.22-201ENST00000391120 215 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 RPS7P13-201ENST00000413955 498 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AL138785.1-201ENST00000425821 331 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 Z93242.1-201ENST00000427102 353 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 RBMX2P4-201ENST00000441256 376 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC026979.1-201ENST00000492525 396 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC098799.3-201ENST00000506095 438 ntBASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.39□□□□□ -1.55
CTDP1Q9Y5B0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms