Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AP000936.3-201ENST00000438127 255 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC108938.1-201ENST00000451204 136 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC114967.1-201ENST00000504890 259 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 MIR5047-201ENST00000579212 100 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 ELOCP29-201ENST00000588193 334 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.75□□□□□ -1.81
SCN11AQ9UI33 RNA5SP502-201ENST00000362694 119 ntBASIC3.75□□□□□ -1.81
SCN11AQ9UI33 SNORA46-201ENST00000384762 135 ntBASIC3.75□□□□□ -1.81
SCN11AQ9UI33 SKINT1L-201ENST00000401057 817 ntBASIC3.75□□□□□ -1.81
SCN11AQ9UI33 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.75□□□□□ -1.81
SCN11AQ9UI33 RPL21P40-201ENST00000428586 483 ntBASIC3.75□□□□□ -1.81
SCN11AQ9UI33 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN11AQ9UI33 SETP12-201ENST00000514068 805 ntBASIC3.75□□□□□ -1.81
SCN11AQ9UI33 AL137072.1-201ENST00000603444 466 ntBASIC3.75□□□□□ -1.81
SCN11AQ9UI33 AC010149.2-201ENST00000637608 315 ntBASIC3.75□□□□□ -1.81
SCN11AQ9UI33 RNU1-112P-201ENST00000364401 164 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 RPS4XP8-201ENST00000402039 771 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 RPL31P12-201ENST00000422587 358 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 RPL23AP22-201ENST00000437556 453 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 FDX1P2-201ENST00000450769 375 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 CYCSP20-201ENST00000473154 315 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 RNU6-237P-201ENST00000515985 71 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 SNORA31.21-201ENST00000517180 77 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 ASNSP1-201ENST00000518311 1939 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 MIR34A-201ENST00000385130 110 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 RNA5SP21-201ENST00000410917 96 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 AC006960.1-201ENST00000419980 153 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 SNORA64.4-201ENST00000516632 81 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.74□□□□□ -1.81
SCN11AQ9UI33 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN11AQ9UI33 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SCN11AQ9UI33 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SCN11AQ9UI33 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SCN11AQ9UI33 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SCN11AQ9UI33 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN11AQ9UI33 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN11AQ9UI33 Z93242.1-201ENST00000427102 353 ntBASIC3.73□□□□□ -1.81
SCN11AQ9UI33 AC106872.2-201ENST00000494303 480 ntBASIC3.73□□□□□ -1.81
SCN11AQ9UI33 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN11AQ9UI33 AC117522.3-201ENST00000507974 584 ntBASIC3.73□□□□□ -1.81
SCN11AQ9UI33 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN11AQ9UI33 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.73□□□□□ -1.81
SCN11AQ9UI33 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.73□□□□□ -1.81
SCN11AQ9UI33 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 RNU2-22P-201ENST00000411266 212 ntBASIC3.72□□□□□ -1.81
SCN11AQ9UI33 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.72□□□□□ -1.81
SCN11AQ9UI33 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 RPL7P36-201ENST00000444633 681 ntBASIC3.72□□□□□ -1.81
SCN11AQ9UI33 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 SNORD109B-201ENST00000458961 67 ntBASIC3.72□□□□□ -1.81
SCN11AQ9UI33 SNORD109A-201ENST00000459128 67 ntBASIC3.72□□□□□ -1.81
SCN11AQ9UI33 AC090525.1-201ENST00000479116 478 ntBASIC3.72□□□□□ -1.81
SCN11AQ9UI33 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 AC007424.1-203ENST00000554613 687 ntBASIC3.72□□□□□ -1.81
SCN11AQ9UI33 AL591516.1-201ENST00000611326 274 ntBASIC3.72□□□□□ -1.81
SCN11AQ9UI33 AC087241.4-201ENST00000612441 480 ntBASIC3.72□□□□□ -1.81
SCN11AQ9UI33 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN11AQ9UI33 OR13C3-201ENST00000374781 1108 ntBASIC3.71□□□□□ -1.81
SCN11AQ9UI33 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SCN11AQ9UI33 RNU2-52P-201ENST00000410680 190 ntBASIC3.71□□□□□ -1.81
SCN11AQ9UI33 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.71□□□□□ -1.81
SCN11AQ9UI33 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.71□□□□□ -1.81
SCN11AQ9UI33 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SCN11AQ9UI33 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.71□□□□□ -1.81
SCN11AQ9UI33 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.71□□□□□ -1.81
SCN11AQ9UI33 AC087468.1-201ENST00000604365 630 ntBASIC3.71□□□□□ -1.81
SCN11AQ9UI33 AC006840.1-201ENST00000623069 542 ntBASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms