Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RNA5SP383-201ENST00000362934 120 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 RNA5SP27-201ENST00000363839 119 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 RNA5SP189-201ENST00000364920 115 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 RNA5SP97-201ENST00000365006 84 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 RNA5SP171-201ENST00000391071 115 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AL136116.1-201ENST00000403591 381 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 RNU2-37P-201ENST00000410695 177 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC007390.1-201ENST00000415722 356 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 MOB1AP1-201ENST00000430903 535 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AL691517.1-201ENST00000440833 1235 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AL035407.2-201ENST00000454090 378 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 RPS20P32-201ENST00000456044 356 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC108729.2-201ENST00000476543 840 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC078785.3-201ENST00000476607 425 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC015724.1-201ENST00000478577 156 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC021146.5-201ENST00000503544 545 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 NPM1P41-201ENST00000512920 831 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 SNORA76.2-201ENST00000517095 137 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC006518.1-201ENST00000541449 943 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC104229.1-201ENST00000561364 255 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 HSPE1P5-201ENST00000561489 272 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC037471.2-201ENST00000564941 598 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 MTCYBP28-201ENST00000566728 1132 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC106734.1-201ENST00000568646 663 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC087499.8-201ENST00000578406 226 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC091488.1-201ENST00000604239 660 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC003001.2-201ENST00000616294 831 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AL354798.1-201ENST00000622505 329 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC058791.1-201ENST00000608412 3198 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 AC116096.1-201ENST00000566804 2314 ntBASIC3.21□□□□□ -1.9
DUX4Q9UBX2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
DUX4Q9UBX2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 RNU6-1243P-201ENST00000364028 107 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 RNU6-796P-201ENST00000391086 107 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 PTMAP5-201ENST00000393073 333 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 SOD2P1-201ENST00000396543 562 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 ATP5F1P6-201ENST00000402768 767 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 MTND3P20-201ENST00000407663 186 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 SNORA11C-201ENST00000408532 129 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 RNA5SP107-201ENST00000411358 122 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC006946.1-201ENST00000429106 328 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 FTH1P1-201ENST00000437933 532 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 CYCSP53-201ENST00000455540 265 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 RPL21P11-201ENST00000461458 483 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 RN7SL442P-201ENST00000473804 320 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 TRBV12-2-201ENST00000489763 344 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 KCTD9P5-201ENST00000504141 1170 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC093853.1-201ENST00000515689 483 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 ATP5F1P7-201ENST00000567330 760 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 KLKP1-201ENST00000595979 403 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 MIR8058-201ENST00000615737 89 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 MIR4278-201ENST00000636094 69 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AF001550.2-201ENST00000636643 217 ntBASIC3.2□□□□□ -1.9
DUX4Q9UBX2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
DUX4Q9UBX2 AC093908.1-201ENST00000623125 8092 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms