Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC009902.3-201ENST00000606235 2172 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC011460.1-201ENST00000636268 1834 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 SNORA74A-201ENST00000364089 198 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 SPTLC1P2-201ENST00000407089 121 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 RNU4-55P-201ENST00000410731 137 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 RPS12P5-201ENST00000423449 371 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC233728.2-201ENST00000425348 757 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AL390119.1-201ENST00000440329 312 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 SPRYD7P1-201ENST00000443861 570 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC013267.1-201ENST00000458227 267 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC053481.1-201ENST00000467217 306 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AL121769.1-201ENST00000469473 401 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 RPS17P15-201ENST00000475609 349 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 RPL23AP41-201ENST00000484754 458 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 PTGES3P3-201ENST00000511479 482 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 BX510359.5-201ENST00000515651 304 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 SCARNA20.4-201ENST00000516969 131 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC021678.3-201ENST00000517893 476 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC100784.1-201ENST00000522790 310 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AL161734.1-201ENST00000609720 557 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC105429.2-201ENST00000610567 517 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AL590099.1-201ENST00000615276 138 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AL359880.1-201ENST00000621879 266 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 SRRM1P3-201ENST00000426911 2678 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AC114947.2-201ENST00000565748 2125 ntBASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM55Q9BYV6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AL049555.1-201ENST00000562834 1933 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 OR4K15-201ENST00000305051 1216 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AL159987.1-201ENST00000347911 293 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 RNU5E-1-201ENST00000362477 120 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 RNU1-19P-201ENST00000363306 165 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 RNU4-12P-201ENST00000365233 139 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC019155.1-201ENST00000382242 574 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 SNORD115-47-201ENST00000391226 86 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 RNA5SP56-201ENST00000410277 118 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC127391.1-201ENST00000411737 98 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC069157.1-201ENST00000421749 137 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC019097.1-201ENST00000424783 735 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC133104.1-201ENST00000429100 218 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 UBE2V1P13-201ENST00000436983 439 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 MTND4P18-201ENST00000447010 465 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 CEACAMP6-201ENST00000452007 574 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC011225.1-201ENST00000457751 369 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 RPL38P1-201ENST00000460914 211 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AL672167.3-201ENST00000465951 960 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 COPS8P2-201ENST00000473228 627 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 RPS3AP14-201ENST00000483907 780 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 RPL32P33-201ENST00000487023 394 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC055855.1-201ENST00000489563 579 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC006499.3-201ENST00000506077 748 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 SAP18P1-201ENST00000512058 390 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC107934.1-201ENST00000522215 217 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms