Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CSMD1Q96PZ7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 AC005261.6-201ENST00000623072 1387 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 RANP4-201ENST00000413361 655 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 RN7SKP283-201ENST00000517197 270 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 NARSP2-201ENST00000518524 679 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 AP005262.1-201ENST00000582646 997 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 AL035425.3-201ENST00000564206 4996 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 AC092079.1-201ENST00000558620 1985 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 RNU6-859P-201ENST00000362728 107 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 SYT14P1-202ENST00000600441 1448 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 RPL7P26-201ENST00000333817 754 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 RPL21P99-201ENST00000480369 423 ntBASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD1Q96PZ7 MIR181A2-201ENST00000384863 110 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 DPRXP4-201ENST00000578053 568 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 PISRT1-201ENST00000626175 531 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 RNA5SP31-201ENST00000411144 127 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 B3GNT2P1-201ENST00000434960 952 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 RN7SKP210-201ENST00000459176 261 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 Y_RNA.670-201ENST00000516255 105 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AC004014.2-201ENST00000623718 5122 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 RNA5SP21-201ENST00000410917 96 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 SETP4-201ENST00000455717 868 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 SEC11B-201ENST00000518383 499 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AP003102.1-201ENST00000525638 661 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AC015871.2-201ENST00000603605 948 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 AC103798.2-201ENST00000624292 632 ntBASIC2.44□□□□□ -2.02
CSMD1Q96PZ7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 SNORD114-30-201ENST00000364448 72 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 ANP32BP2-201ENST00000454525 545 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AC104027.1-201ENST00000521887 300 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AC015917.1-201ENST00000579654 510 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 OR4G2P-202ENST00000641004 1759 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 RPL21P75-201ENST00000396599 483 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 RPL21P1-201ENST00000399532 476 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 RPL21P28-201ENST00000401418 483 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AL592114.1-201ENST00000403842 483 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AC009414.1-201ENST00000427200 443 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 RPL21P16-201ENST00000495531 483 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 DUTP6-201ENST00000425573 462 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 SCARNA17.1-201ENST00000516211 143 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 SCARNA17.2-201ENST00000516334 143 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 NTAN1P1-201ENST00000603150 646 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 SCARNA17.4-201ENST00000614296 143 ntBASIC2.43□□□□□ -2.02
CSMD1Q96PZ7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD1Q96PZ7 ZNF72P-201ENST00000425869 1908 ntBASIC2.42□□□□□ -2.02
CSMD1Q96PZ7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD1Q96PZ7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD1Q96PZ7 AC104297.1-201ENST00000393779 870 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms