Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AL512646.1-201ENST00000269395 1077 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 MIR449B-201ENST00000384995 97 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 MIR218-2-201ENST00000385006 110 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 MRPS18BP2-201ENST00000434310 759 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 RNFT1P2-201ENST00000443064 757 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 BX276092.4-201ENST00000452056 248 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AC022146.1-201ENST00000595307 847 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AC018926.3-201ENST00000618841 406 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 AP003355.3-201ENST00000623465 114 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 OR6C71P-202ENST00000641886 1107 ntBASIC3.69□□□□□ -1.82
RPRD1AQ96P16 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPRD1AQ96P16 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC138915.3-201ENST00000562908 1389 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC016716.1-201ENST00000265882 708 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 RNU1-18P-201ENST00000363062 164 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 RNA5SP27-201ENST00000363839 119 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 UBE2V1P11-201ENST00000411559 285 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 CYCSP4-201ENST00000429682 331 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC073063.1-201ENST00000434352 607 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 YWHAZP8-201ENST00000436935 731 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 MTCO3P20-201ENST00000454926 688 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 RN7SL93P-201ENST00000463035 293 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 RPL31P13-201ENST00000484151 370 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 HMGN1P15-201ENST00000513870 295 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 SETP12-201ENST00000514068 805 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 RN7SKP13-201ENST00000515933 244 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 RN7SKP96-201ENST00000516948 297 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC008489.1-201ENST00000524271 483 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC074029.1-201ENST00000552531 1044 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 U3.45-201ENST00000607547 219 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 MIR92B-201ENST00000607575 96 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AL163051.2-201ENST00000618976 735 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 HPVC1-201ENST00000629899 1198 ntBASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.68□□□□□ -1.82
RPRD1AQ96P16 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 ATF1P1-201ENST00000406040 927 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 DBIP2-201ENST00000419076 262 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC241520.1-201ENST00000422654 1099 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 SDCBPP2-201ENST00000424643 885 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 FABP5P3-201ENST00000437960 408 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 BTBD7P2-201ENST00000441962 620 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms