Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.3□□□□□ -1.72
USP47Q96K76 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP47Q96K76 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.29□□□□□ -1.72
USP47Q96K76 RNA5SP502-201ENST00000362694 119 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP47Q96K76 SNORD15B-201ENST00000384714 146 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 ARF4P3-201ENST00000397387 509 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AC110754.1-201ENST00000399740 601 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AL034374.1-201ENST00000406329 351 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AL353692.2-201ENST00000407054 335 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 RNA5SP293-201ENST00000410527 113 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 RN7SKP220-201ENST00000410611 288 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AC009302.1-201ENST00000417147 390 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AL392003.1-201ENST00000434394 243 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 CACYBPP1-201ENST00000438592 684 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.29□□□□□ -1.72
USP47Q96K76 HAUS1P1-201ENST00000505275 832 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AF186190.1-201ENST00000517470 480 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AC027309.2-201ENST00000520566 192 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AC008676.3-201ENST00000521237 435 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 PSMA2P1-201ENST00000526365 646 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.29□□□□□ -1.72
USP47Q96K76 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.29□□□□□ -1.72
USP47Q96K76 AC087565.3-202ENST00000642085 1603 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 DDX18P3-201ENST00000404856 2007 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 AC107081.3-201ENST00000612715 2034 ntBASIC4.29□□□□□ -1.72
USP47Q96K76 OR5H2-201ENST00000355273 945 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
USP47Q96K76 RNA5SP383-201ENST00000362934 120 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 U3.6-201ENST00000363622 211 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.28□□□□□ -1.72
USP47Q96K76 SNORD65-201ENST00000391079 73 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.28□□□□□ -1.72
USP47Q96K76 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.28□□□□□ -1.72
USP47Q96K76 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP47Q96K76 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.28□□□□□ -1.72
USP47Q96K76 RPS27AP1-201ENST00000475545 471 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.28□□□□□ -1.72
USP47Q96K76 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.28□□□□□ -1.72
USP47Q96K76 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.28□□□□□ -1.72
USP47Q96K76 BMS1P7-201ENST00000602440 1052 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 RPL12P50-201ENST00000603116 116 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 AC084373.1-201ENST00000603311 235 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 AC116312.1-201ENST00000606841 314 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 AC019080.5-201ENST00000624891 757 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 AC092159.4-201ENST00000624944 550 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 AL137790.1-201ENST00000634283 177 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 BMS1P21-201ENST00000634565 365 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
USP47Q96K76 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.28□□□□□ -1.72
USP47Q96K76 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP47Q96K76 AC090971.4-201ENST00000560291 1800 ntBASIC4.28□□□□□ -1.72
USP47Q96K76 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
USP47Q96K76 RPL23AP48-201ENST00000406913 488 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.27□□□□□ -1.73
USP47Q96K76 RPL32P35-201ENST00000415214 394 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 RPL35AP12-201ENST00000425362 338 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.27□□□□□ -1.73
USP47Q96K76 RPL37P4-201ENST00000448908 268 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 AL136097.1-201ENST00000456945 913 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP47Q96K76 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.27□□□□□ -1.73
USP47Q96K76 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.27□□□□□ -1.73
USP47Q96K76 AP002404.1-201ENST00000532005 451 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.27□□□□□ -1.73
USP47Q96K76 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.27□□□□□ -1.73
USP47Q96K76 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.27□□□□□ -1.73
USP47Q96K76 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.27□□□□□ -1.73
USP47Q96K76 AL450326.2-201ENST00000421913 1962 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.27□□□□□ -1.73
USP47Q96K76 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP47Q96K76 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP47Q96K76 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.27□□□□□ -1.73
USP47Q96K76 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.27□□□□□ -1.73
USP47Q96K76 AC107027.3-201ENST00000565095 3473 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP47Q96K76 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP47Q96K76 RNU6-805P-201ENST00000365643 106 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 OR2AS1P-201ENST00000427827 319 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.27□□□□□ -1.73
USP47Q96K76 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.27□□□□□ -1.73
USP47Q96K76 AC007998.5-201ENST00000622938 237 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 AL356490.1-201ENST00000623079 479 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 OR5BR1P-201ENST00000524992 1330 ntBASIC4.27□□□□□ -1.73
USP47Q96K76 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP47Q96K76 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP47Q96K76 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP47Q96K76 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.26□□□□□ -1.73
USP47Q96K76 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP47Q96K76 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.26□□□□□ -1.73
USP47Q96K76 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP47Q96K76 MIR22-201ENST00000362190 85 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 RNU6-301P-201ENST00000384277 107 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 RNU6-178P-201ENST00000384631 104 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
USP47Q96K76 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP47Q96K76 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.26□□□□□ -1.73
USP47Q96K76 AL355994.1-201ENST00000424379 260 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms