Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNE4Q8N205 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNE4Q8N205 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC092162.3-201ENST00000624511 1624 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNE4Q8N205 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNE4Q8N205 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC093719.1-202ENST00000392735 373 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 RNA5SP498-201ENST00000411342 120 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC093578.1-201ENST00000415219 368 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 PAICSP7-201ENST00000419829 962 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC069157.1-201ENST00000421749 137 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC018644.1-201ENST00000429934 551 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AL445584.1-201ENST00000431451 330 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 OR2B8P-201ENST00000432841 938 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AL353748.1-201ENST00000440753 474 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AL592437.1-201ENST00000443781 492 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 GAPDHP36-201ENST00000480688 918 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC147055.4-201ENST00000504399 745 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 MTND2P33-201ENST00000506452 1031 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SYNE4Q8N205 PRELID3BP4-201ENST00000515476 571 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 DUXAP2-201ENST00000519198 589 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC083923.1-201ENST00000523708 376 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC128687.1-201ENST00000605304 619 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AL031775.1-201ENST00000607014 887 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AC005086.4-201ENST00000623065 213 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 U6.107-201ENST00000637108 79 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 AP000542.2-201ENST00000623199 6179 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNE4Q8N205 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNE4Q8N205 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SYNE4Q8N205 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SYNE4Q8N205 AP000473.2-201ENST00000602659 1537 ntBASIC5.28□□□□□ -1.56
SYNE4Q8N205 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AP005901.5-201ENST00000545779 1796 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SYNE4Q8N205 SEC63P2-201ENST00000503863 1939 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SYNE4Q8N205 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
SYNE4Q8N205 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SYNE4Q8N205 Y_RNA.248-201ENST00000364501 109 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 RNU6-707P-201ENST00000364647 95 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AL136131.1-201ENST00000406079 803 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 TPMTP3-201ENST00000411928 735 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 OR6K4P-201ENST00000423179 955 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 HMGN2P27-201ENST00000427352 270 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 RPL23AP25-201ENST00000430973 463 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 ATP5F1P1-201ENST00000433775 569 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 CEACAMP1-201ENST00000434624 1035 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 PPIAP13-201ENST00000434706 478 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AL121601.2-201ENST00000438019 707 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AC116353.2-201ENST00000505332 712 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 RPL37P25-201ENST00000507308 276 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 CDC42P4-201ENST00000510507 563 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 FABP5P5-201ENST00000515537 406 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AP001317.1-201ENST00000531194 960 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 AC006064.5-201ENST00000541782 248 ntBASIC5.27□□□□□ -1.57
SYNE4Q8N205 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.27□□□□□ -1.57
SYNE4Q8N205 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms