Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC024257.5-201ENST00000612739 531 ntBASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 AC008083.4-201ENST00000615076 444 ntBASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 AC084824.4-201ENST00000620106 731 ntBASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 CR381572.1-201ENST00000625098 102 ntBASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 MIR3653-201ENST00000625572 110 ntBASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 CYP3A51P-201ENST00000633513 256 ntBASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 MTND2P41-201ENST00000637599 773 ntBASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
NHLRC1Q6VVB1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 CDR1-202ENST00000625883 1485 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 RNU6-730P-201ENST00000383954 104 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 SNORD116-12-201ENST00000384468 92 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 MIR1179-201ENST00000408703 91 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 RNU4-25P-201ENST00000410569 230 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC011933.1-201ENST00000413334 321 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AL391219.1-201ENST00000422570 483 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC009480.2-201ENST00000422916 432 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 BTF3P10-201ENST00000433415 495 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 RPL23AP74-201ENST00000437246 471 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 COX6CP18-201ENST00000448769 222 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC116533.1-201ENST00000459748 321 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 PLGLA-201ENST00000465668 449 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 RPL23AP44-201ENST00000482216 473 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 MTCYBP16-201ENST00000509187 1129 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 MTCYBP37-201ENST00000510642 1133 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 RNA5SP309-201ENST00000516670 106 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 SCARNA1-201ENST00000517138 166 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 C1GALT1P3-201ENST00000522049 819 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC063950.1-201ENST00000552036 308 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC006116.5-201ENST00000591936 559 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC091946.2-201ENST00000606105 291 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC024933.1-201ENST00000608472 348 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AL121652.1-201ENST00000608851 448 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC078899.5-201ENST00000612475 178 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC022509.4-201ENST00000621404 572 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AC004925.1-201ENST00000624256 2706 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 AL031985.3-201ENST00000565390 2449 ntBASIC3.73□□□□□ -1.81
NHLRC1Q6VVB1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AL365440.1-201ENST00000436135 2167 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AP001350.1-201ENST00000601906 1524 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 MIR122-201ENST00000385044 85 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AL138880.1-201ENST00000405824 642 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 RNU4-78P-201ENST00000410940 126 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AL449283.1-202ENST00000418249 604 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 MTND2P16-201ENST00000419987 799 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 CHIAP3-201ENST00000423668 1133 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 USP12PY-201ENST00000427677 1064 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 USP9YP31-201ENST00000431405 881 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 NPM1P49-201ENST00000448027 714 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 RAD23BP3-201ENST00000454157 1152 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 RPS29P19-201ENST00000479709 171 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC006517.1-201ENST00000480485 328 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC010625.1-201ENST00000511296 403 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 OR5D17P-201ENST00000531492 978 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms