Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 SAGE3P-201ENST00000619800 1635 ntBASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
PRPF38BQ5VTL8 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
PRPF38BQ5VTL8 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
PRPF38BQ5VTL8 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PRPF38BQ5VTL8 PROS2P-201ENST00000474651 1951 ntBASIC6.71□□□□□ -1.33
PRPF38BQ5VTL8 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
PRPF38BQ5VTL8 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PRPF38BQ5VTL8 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.71□□□□□ -1.33
PRPF38BQ5VTL8 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PRPF38BQ5VTL8 AC025470.1-201ENST00000510053 2032 ntBASIC6.71□□□□□ -1.33
PRPF38BQ5VTL8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 RPL23P2-201ENST00000320371 421 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 RNU6-562P-201ENST00000362731 107 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 RNU1-130P-201ENST00000363930 160 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 RNU6-1243P-201ENST00000364028 107 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 RNU5E-6P-201ENST00000365574 115 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 SNORA11F-201ENST00000408237 128 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 RPL30P2-201ENST00000414021 291 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 E2F6P2-201ENST00000420708 748 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 AC016696.1-201ENST00000446949 318 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 AC116533.1-201ENST00000459748 321 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 RPL21P8-201ENST00000465083 535 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 AC006967.1-201ENST00000467608 589 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 RPL21P93-201ENST00000480465 489 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 Y_RNA.708-201ENST00000516950 96 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 BNIP3P1-201ENST00000547295 580 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 AC005357.1-201ENST00000588399 301 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 AL138726.1-201ENST00000614873 333 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 AL353662.3-201ENST00000625131 237 ntBASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PRPF38BQ5VTL8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC016745.2-201ENST00000608834 3443 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 Y_RNA.80-201ENST00000362996 102 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AL451142.1-201ENST00000375867 775 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 Y_RNA.389-201ENST00000383924 113 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 RN7SKP62-201ENST00000384539 329 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 MIR548I3-201ENST00000408378 149 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 MIR548I1-201ENST00000408810 149 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC009237.10-201ENST00000414112 510 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 GJA6P-201ENST00000415117 1042 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC126120.1-201ENST00000431082 470 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC016712.1-201ENST00000431088 378 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 PPIAP10-201ENST00000438675 458 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 GSTA11P-201ENST00000452866 669 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 snoU13.7-201ENST00000459220 104 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 RPS20P21-201ENST00000466859 343 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC021074.2-201ENST00000468434 172 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 RN7SL57P-201ENST00000493687 290 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 COX7A2P2-201ENST00000505291 250 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC107222.1-201ENST00000510899 637 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 RNU6-64P-201ENST00000517119 105 ntBASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
PRPF38BQ5VTL8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms