Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SIX1Q15475 MED28P5-201ENST00000528254 438 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 LRRC6P1-201ENST00000532188 885 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.71□□□□□ -1.82
SIX1Q15475 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX1Q15475 AL132857.1-201ENST00000555180 708 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 TGIF1P1-201ENST00000558095 802 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX1Q15475 AC090751.1-201ENST00000566966 267 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX1Q15475 BNIP3P38-201ENST00000601117 544 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SIX1Q15475 AC009948.4-201ENST00000604692 675 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AL365400.2-201ENST00000605604 902 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 PART1_2.1-201ENST00000612397 250 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 MIR6875-201ENST00000617506 72 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AC092608.3-201ENST00000625017 386 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AC017104.5-201ENST00000637647 639 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX1Q15475 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.71□□□□□ -1.82
SIX1Q15475 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX1Q15475 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX1Q15475 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX1Q15475 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX1Q15475 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX1Q15475 MIR525-201ENST00000384978 85 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 MIR134-201ENST00000385258 73 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 MTCO1P56-201ENST00000401674 224 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 NCSTNP1-201ENST00000406229 144 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 MTATP6P20-201ENST00000414147 562 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 BTF3P8-201ENST00000414577 526 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX1Q15475 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX1Q15475 AC093698.1-201ENST00000423843 571 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 NANOGP5-201ENST00000424456 877 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX1Q15475 MTCYBP15-201ENST00000433123 1127 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX1Q15475 RPS7P5-201ENST00000441482 581 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 OR10R1P-201ENST00000441524 1141 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX1Q15475 AC099063.2-201ENST00000446360 662 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SIX1Q15475 TPMTP4-201ENST00000450749 678 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AC021205.2-201ENST00000480069 347 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 RPL21P131-201ENST00000497298 483 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 SETP14-201ENST00000497538 873 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX1Q15475 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX1Q15475 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX1Q15475 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX1Q15475 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX1Q15475 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX1Q15475 OR10V3P-201ENST00000525712 725 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX1Q15475 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX1Q15475 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.7□□□□□ -1.82
SIX1Q15475 DUXAP6-201ENST00000553858 601 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX1Q15475 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX1Q15475 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX1Q15475 AC074050.1-201ENST00000563247 211 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AL158211.1-201ENST00000566763 763 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 MTND4LP24-201ENST00000572277 291 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AC090312.2-201ENST00000582687 378 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX1Q15475 VN1R88P-201ENST00000596787 292 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX1Q15475 PSMA6P4-201ENST00000603247 718 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AC123786.2-201ENST00000603459 275 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 RNU4-5P-201ENST00000607255 135 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX1Q15475 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX1Q15475 AC005344.1-201ENST00000613391 459 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX1Q15475 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX1Q15475 AC116563.2-201ENST00000624751 535 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX1Q15475 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX1Q15475 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX1Q15475 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX1Q15475 PRO1804-201ENST00000623780 2050 ntBASIC3.7□□□□□ -1.82
SIX1Q15475 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 AC111188.2-201ENST00000529697 1387 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 SNORA48.7-201ENST00000391302 135 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 ANAPC10P1-201ENST00000395991 556 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 RN7SKP285-201ENST00000410137 318 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 RN7SKP202-201ENST00000410439 330 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 RNU6-77P-201ENST00000410554 91 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 RNU6-55P-201ENST00000411092 107 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 RN7SKP53-201ENST00000411337 315 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 RNU6-954P-201ENST00000411355 107 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms