Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AP003396.4-201ENST00000527574 265 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 AP000648.1-201ENST00000529682 397 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 OR4P1P-201ENST00000530808 1136 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 OR5B10P-201ENST00000532869 642 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDH1Q08174 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDH1Q08174 AC128657.1-201ENST00000549459 145 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDH1Q08174 TXNP4-201ENST00000575018 310 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 MIR4675-201ENST00000577898 77 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 AC008507.3-201ENST00000585753 472 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDH1Q08174 XIAPP1-201ENST00000603162 600 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDH1Q08174 AC019193.3-201ENST00000609144 554 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 AC022400.9-201ENST00000623633 273 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 AL355480.1-201ENST00000629041 99 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
PCDH1Q08174 AC027088.4-201ENST00000611559 1947 ntBASIC5.65□□□□□ -1.51
PCDH1Q08174 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDH1Q08174 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDH1Q08174 PROS2P-201ENST00000474651 1951 ntBASIC5.65□□□□□ -1.51
PCDH1Q08174 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDH1Q08174 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDH1Q08174 ELL2P4-201ENST00000446870 1376 ntBASIC5.65□□□□□ -1.51
PCDH1Q08174 AC097063.1-201ENST00000426714 1797 ntBASIC5.65□□□□□ -1.51
PCDH1Q08174 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PCDH1Q08174 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDH1Q08174 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
PCDH1Q08174 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.65□□□□□ -1.51
PCDH1Q08174 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PCDH1Q08174 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PCDH1Q08174 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AP001350.1-201ENST00000601906 1524 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDH1Q08174 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PCDH1Q08174 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDH1Q08174 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 COX6B1P3-201ENST00000312310 260 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 U3.10-201ENST00000364459 214 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 U3.12-201ENST00000364498 214 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 Y_RNA.339-201ENST00000365325 102 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 Y_RNA.414-201ENST00000384011 101 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 RNU6-1293P-201ENST00000384077 107 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 RNU6-1226P-201ENST00000384317 107 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDH1Q08174 RPL34P3-201ENST00000421454 338 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDH1Q08174 MTATP6P16-201ENST00000434543 526 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 FTH1P1-201ENST00000437933 532 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AMYP1-201ENST00000440059 1023 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 EIF5AP4-201ENST00000441206 465 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AL359955.2-201ENST00000445380 353 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDH1Q08174 AC004129.2-201ENST00000457229 287 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 MTND5P22-201ENST00000458380 195 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 RNU7-182P-201ENST00000459009 62 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AL122020.1-201ENST00000472287 459 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 RPL37P23-201ENST00000492641 294 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDH1Q08174 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDH1Q08174 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDH1Q08174 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDH1Q08174 AC104057.1-201ENST00000515547 497 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDH1Q08174 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDH1Q08174 AC068993.1-201ENST00000546724 589 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDH1Q08174 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDH1Q08174 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDH1Q08174 AC100830.2-201ENST00000581636 240 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDH1Q08174 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDH1Q08174 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 PSMA6P4-201ENST00000603247 718 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AC245389.1-201ENST00000605141 529 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AC103710.2-201ENST00000609912 942 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 AC245517.5-201ENST00000611529 162 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 AC244100.1-202ENST00000621554 382 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 RNU6-156P-201ENST00000621869 107 ntBASIC5.64□□□□□ -1.51
PCDH1Q08174 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
PCDH1Q08174 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
PCDH1Q08174 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
PCDH1Q08174 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDH1Q08174 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH1Q08174 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDH1Q08174 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PCDH1Q08174 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms