Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.56□□□□□ -2
HIST1H1AQ02539 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.56□□□□□ -2
HIST1H1AQ02539 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
HIST1H1AQ02539 AC073055.1-201ENST00000456901 1621 ntBASIC2.56□□□□□ -2
HIST1H1AQ02539 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HIST1H1AQ02539 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HIST1H1AQ02539 RNA5SP515-201ENST00000364570 118 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 RNA5SP479-201ENST00000364858 117 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
HIST1H1AQ02539 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.55□□□□□ -2
HIST1H1AQ02539 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
HIST1H1AQ02539 RN7SKP202-201ENST00000410439 330 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.55□□□□□ -2
HIST1H1AQ02539 CKS1BP5-201ENST00000434172 273 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 AC073063.1-201ENST00000434352 607 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 RPL23AP33-201ENST00000442301 452 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 COX6CP2-201ENST00000444980 225 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.55□□□□□ -2
HIST1H1AQ02539 OR7L1P-201ENST00000456181 380 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 AL590639.1-201ENST00000456484 337 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.55□□□□□ -2
HIST1H1AQ02539 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.55□□□□□ -2
HIST1H1AQ02539 RPL5P24-201ENST00000463742 885 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 AC090071.1-201ENST00000507713 644 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.55□□□□□ -2
HIST1H1AQ02539 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.55□□□□□ -2
HIST1H1AQ02539 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.55□□□□□ -2
HIST1H1AQ02539 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.55□□□□□ -2
HIST1H1AQ02539 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.55□□□□□ -2
HIST1H1AQ02539 GTF2IP22-201ENST00000554443 182 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 ZNF285B-201ENST00000561698 1767 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.55□□□□□ -2
HIST1H1AQ02539 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.55□□□□□ -2
HIST1H1AQ02539 AC020914.6-201ENST00000594327 272 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.55□□□□□ -2
HIST1H1AQ02539 AC090617.7-201ENST00000623952 126 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 AC084035.1-201ENST00000634543 607 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 LRRC77P-213ENST00000637727 880 ntBASIC2.55□□□□□ -2
HIST1H1AQ02539 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.55□□□□□ -2
HIST1H1AQ02539 AL353743.1-202ENST00000431724 1695 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H1AQ02539 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.54□□□□□ -2
HIST1H1AQ02539 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.54□□□□□ -2
HIST1H1AQ02539 RNA5SP197-201ENST00000363357 119 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 MIR554-201ENST00000384874 96 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H1AQ02539 RPL32P35-201ENST00000415214 394 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.54□□□□□ -2
HIST1H1AQ02539 AC006960.1-201ENST00000419980 153 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 AC244098.2-201ENST00000422068 99 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.54□□□□□ -2
HIST1H1AQ02539 AC025518.1-201ENST00000479856 347 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.54□□□□□ -2
HIST1H1AQ02539 APOOP4-201ENST00000513530 597 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 RNU6-319P-201ENST00000516025 108 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 RN7SKP116-201ENST00000516902 319 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 RNU1-45P-201ENST00000517191 141 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
HIST1H1AQ02539 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H1AQ02539 AC103843.2-201ENST00000530523 682 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.54□□□□□ -2
HIST1H1AQ02539 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H1AQ02539 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H1AQ02539 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
HIST1H1AQ02539 AC231759.1-201ENST00000616455 597 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H1AQ02539 AC073348.1-201ENST00000623002 331 ntBASIC2.54□□□□□ -2
HIST1H1AQ02539 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H1AQ02539 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H1AQ02539 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.54□□□□□ -2
HIST1H1AQ02539 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.54□□□□□ -2
HIST1H1AQ02539 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
HIST1H1AQ02539 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.54□□□□□ -2
HIST1H1AQ02539 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HIST1H1AQ02539 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HIST1H1AQ02539 MTCO1P24-201ENST00000515438 1558 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 HSPA8P19-201ENST00000505359 1517 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HIST1H1AQ02539 AL365440.1-201ENST00000436135 2167 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.53□□□□□ -2
HIST1H1AQ02539 AC093831.2-201ENST00000624393 3427 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 MAPK10-322ENST00000641485 4530 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
HIST1H1AQ02539 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.53□□□□□ -2
HIST1H1AQ02539 SNORA5A-201ENST00000384111 134 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AL590290.1-201ENST00000405336 380 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H1AQ02539 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.53□□□□□ -2
HIST1H1AQ02539 BX842559.1-201ENST00000419615 532 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AC012065.2-201ENST00000421295 375 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H1AQ02539 RFESDP1-201ENST00000422350 461 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 TRGV7-201ENST00000427089 353 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.53□□□□□ -2
HIST1H1AQ02539 HMGB3P11-201ENST00000440127 604 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 RRM2P4-201ENST00000441721 562 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 Z99127.3-201ENST00000448158 395 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 CCRL1P1-201ENST00000449542 1053 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms