Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SNORA51-201ENST00000606420 132 ntBASIC1.91□□□□□ -2.1
RPL39P62891 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC1.91□□□□□ -2.1
RPL39P62891 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.91□□□□□ -2.1
RPL39P62891 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPL39P62891 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
RPL39P62891 AC093010.3-201ENST00000570269 15214 ntBASIC1.91□□□□□ -2.1
RPL39P62891 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
RPL39P62891 RNU1-64P-201ENST00000365443 163 ntBASIC1.9□□□□□ -2.11
RPL39P62891 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC1.9□□□□□ -2.11
RPL39P62891 TRAV35-201ENST00000390462 330 ntBASIC1.9□□□□□ -2.11
RPL39P62891 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.9□□□□□ -2.11
RPL39P62891 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.9□□□□□ -2.11
RPL39P62891 AL096701.2-201ENST00000416920 238 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.9□□□□□ -2.11
RPL39P62891 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.9□□□□□ -2.11
RPL39P62891 RPS20P5-201ENST00000434808 360 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AL591503.2-201ENST00000442314 1005 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.9□□□□□ -2.11
RPL39P62891 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.9□□□□□ -2.11
RPL39P62891 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC1.9□□□□□ -2.11
RPL39P62891 KC877373.1-201ENST00000479066 408 ntBASIC1.9□□□□□ -2.11
RPL39P62891 RN7SL504P-201ENST00000494496 287 ntBASIC1.9□□□□□ -2.11
RPL39P62891 ACTR3BP4-201ENST00000503033 1244 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AC010285.3-201ENST00000511668 676 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AC090136.1-201ENST00000520009 240 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.9□□□□□ -2.11
RPL39P62891 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.9□□□□□ -2.11
RPL39P62891 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
RPL39P62891 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.9□□□□□ -2.11
RPL39P62891 HNRNPCP4-201ENST00000571636 900 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC1.9□□□□□ -2.11
RPL39P62891 AC009303.3-201ENST00000591103 736 ntBASIC1.9□□□□□ -2.11
RPL39P62891 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC1.9□□□□□ -2.11
RPL39P62891 ABI1P1-201ENST00000603375 1120 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AL160237.3-201ENST00000604114 1013 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AC084036.1-201ENST00000609190 508 ntBASIC1.9□□□□□ -2.11
RPL39P62891 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC1.9□□□□□ -2.11
RPL39P62891 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
RPL39P62891 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.9□□□□□ -2.11
RPL39P62891 PLCE1P1-201ENST00000622094 305 ntBASIC1.9□□□□□ -2.11
RPL39P62891 AC016717.3-201ENST00000624730 554 ntBASIC1.9□□□□□ -2.11
RPL39P62891 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC1.9□□□□□ -2.11
RPL39P62891 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RPL39P62891 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.9□□□□□ -2.11
RPL39P62891 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPL39P62891 AL451142.2-201ENST00000429076 2090 ntBASIC1.9□□□□□ -2.11
RPL39P62891 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPL39P62891 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPL39P62891 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPL39P62891 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC1.89□□□□□ -2.11
RPL39P62891 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPL39P62891 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC1.89□□□□□ -2.11
RPL39P62891 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.89□□□□□ -2.11
RPL39P62891 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.89□□□□□ -2.11
RPL39P62891 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPL39P62891 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.89□□□□□ -2.11
RPL39P62891 RPS20P25-201ENST00000412447 352 ntBASIC1.89□□□□□ -2.11
RPL39P62891 EIF2S2P3-201ENST00000428356 999 ntBASIC1.89□□□□□ -2.11
RPL39P62891 AC091390.1-201ENST00000433904 331 ntBASIC1.89□□□□□ -2.11
RPL39P62891 SETP8-201ENST00000435341 628 ntBASIC1.89□□□□□ -2.11
RPL39P62891 CACYBPP2-201ENST00000453625 678 ntBASIC1.89□□□□□ -2.11
RPL39P62891 AL161747.1-201ENST00000480068 358 ntBASIC1.89□□□□□ -2.11
RPL39P62891 SRIP1-201ENST00000489235 288 ntBASIC1.89□□□□□ -2.11
RPL39P62891 AC098799.2-201ENST00000509466 868 ntBASIC1.89□□□□□ -2.11
RPL39P62891 HMGB1P41-201ENST00000520234 440 ntBASIC1.89□□□□□ -2.11
RPL39P62891 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC1.89□□□□□ -2.11
RPL39P62891 OR8L1P-201ENST00000534005 955 ntBASIC1.89□□□□□ -2.11
RPL39P62891 OR8X1P-201ENST00000534542 869 ntBASIC1.89□□□□□ -2.11
RPL39P62891 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.89□□□□□ -2.11
RPL39P62891 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.89□□□□□ -2.11
RPL39P62891 MIR4635-201ENST00000583759 79 ntBASIC1.89□□□□□ -2.11
RPL39P62891 AC008277.2-201ENST00000605196 797 ntBASIC1.89□□□□□ -2.11
RPL39P62891 AL136295.6-201ENST00000610486 658 ntBASIC1.89□□□□□ -2.11
RPL39P62891 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.89□□□□□ -2.11
RPL39P62891 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.89□□□□□ -2.11
RPL39P62891 U6.105-201ENST00000637379 88 ntBASIC1.89□□□□□ -2.11
RPL39P62891 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPL39P62891 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
RPL39P62891 AL445437.1-201ENST00000623157 3087 ntBASIC1.89□□□□□ -2.11
RPL39P62891 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPL39P62891 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.88□□□□□ -2.11
RPL39P62891 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPL39P62891 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.88□□□□□ -2.11
RPL39P62891 CDY11P-201ENST00000447168 1651 ntBASIC1.88□□□□□ -2.11
RPL39P62891 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPL39P62891 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RPL39P62891 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPL39P62891 RNU6-851P-201ENST00000384565 107 ntBASIC1.88□□□□□ -2.11
RPL39P62891 MIR200C-201ENST00000384980 68 ntBASIC1.88□□□□□ -2.11
RPL39P62891 RAB28P1-201ENST00000411517 641 ntBASIC1.88□□□□□ -2.11
RPL39P62891 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC1.88□□□□□ -2.11
RPL39P62891 RAD23BP2-201ENST00000416003 1207 ntBASIC1.88□□□□□ -2.11
RPL39P62891 RPL36AP36-201ENST00000418616 301 ntBASIC1.88□□□□□ -2.11
RPL39P62891 NPM1P24-201ENST00000428039 894 ntBASIC1.88□□□□□ -2.11
RPL39P62891 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.88□□□□□ -2.11
RPL39P62891 CYCSP43-201ENST00000438233 310 ntBASIC1.88□□□□□ -2.11
RPL39P62891 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC1.88□□□□□ -2.11
RPL39P62891 AC112492.1-201ENST00000449607 712 ntBASIC1.88□□□□□ -2.11
RPL39P62891 SNRPGP3-201ENST00000469405 227 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms