Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ACTBP60709 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.03□□□□□ -1.92
ACTBP60709 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.03□□□□□ -1.92
ACTBP60709 AC022916.3-201ENST00000592961 742 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AC091488.1-201ENST00000604239 660 ntBASIC3.03□□□□□ -1.92
ACTBP60709 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.03□□□□□ -1.92
ACTBP60709 AL590282.1-201ENST00000610379 1136 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AC024941.1-201ENST00000612250 334 ntBASIC3.03□□□□□ -1.92
ACTBP60709 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.03□□□□□ -1.92
ACTBP60709 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
ACTBP60709 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ACTBP60709 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.02□□□□□ -1.93
ACTBP60709 XPOTP1-201ENST00000443317 2398 ntBASIC3.02□□□□□ -1.93
ACTBP60709 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
ACTBP60709 AC093908.1-201ENST00000623125 8092 ntBASIC3.02□□□□□ -1.93
ACTBP60709 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
ACTBP60709 Y_RNA.126-201ENST00000363382 111 ntBASIC3.02□□□□□ -1.93
ACTBP60709 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ACTBP60709 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.02□□□□□ -1.93
ACTBP60709 AC012498.1-201ENST00000424037 437 ntBASIC3.02□□□□□ -1.93
ACTBP60709 SDCBPP2-201ENST00000424643 885 ntBASIC3.02□□□□□ -1.93
ACTBP60709 AL606490.7-201ENST00000433136 191 ntBASIC3.02□□□□□ -1.93
ACTBP60709 RPS29P7-201ENST00000439662 171 ntBASIC3.02□□□□□ -1.93
ACTBP60709 RPL17P49-201ENST00000443728 411 ntBASIC3.02□□□□□ -1.93
ACTBP60709 Z77249.1-201ENST00000444622 1175 ntBASIC3.02□□□□□ -1.93
ACTBP60709 TPTE2P6-202ENST00000445572 1007 ntBASIC3.02□□□□□ -1.93
ACTBP60709 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.02□□□□□ -1.93
ACTBP60709 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ACTBP60709 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.02□□□□□ -1.93
ACTBP60709 GAPDHP36-201ENST00000480688 918 ntBASIC3.02□□□□□ -1.93
ACTBP60709 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
ACTBP60709 AC021146.5-201ENST00000503544 545 ntBASIC3.02□□□□□ -1.93
ACTBP60709 KCTD9P5-201ENST00000504141 1170 ntBASIC3.02□□□□□ -1.93
ACTBP60709 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.02□□□□□ -1.93
ACTBP60709 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.02□□□□□ -1.93
ACTBP60709 RN7SKP141-201ENST00000516167 338 ntBASIC3.02□□□□□ -1.93
ACTBP60709 RNA5SP468-201ENST00000516782 93 ntBASIC3.02□□□□□ -1.93
ACTBP60709 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.02□□□□□ -1.93
ACTBP60709 MED28P5-201ENST00000528254 438 ntBASIC3.02□□□□□ -1.93
ACTBP60709 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.02□□□□□ -1.93
ACTBP60709 BNIP3P5-201ENST00000562290 498 ntBASIC3.02□□□□□ -1.93
ACTBP60709 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.02□□□□□ -1.93
ACTBP60709 RN7SL703P-201ENST00000578485 302 ntBASIC3.02□□□□□ -1.93
ACTBP60709 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.02□□□□□ -1.93
ACTBP60709 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.02□□□□□ -1.93
ACTBP60709 AC004832.5-201ENST00000608677 401 ntBASIC3.02□□□□□ -1.93
ACTBP60709 AC107294.3-201ENST00000609211 526 ntBASIC3.02□□□□□ -1.93
ACTBP60709 AC019176.2-201ENST00000611579 315 ntBASIC3.02□□□□□ -1.93
ACTBP60709 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ACTBP60709 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ACTBP60709 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.02□□□□□ -1.93
ACTBP60709 AL357559.1-201ENST00000622228 274 ntBASIC3.02□□□□□ -1.93
ACTBP60709 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.02□□□□□ -1.93
ACTBP60709 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ACTBP60709 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ACTBP60709 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
ACTBP60709 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.02□□□□□ -1.93
ACTBP60709 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ACTBP60709 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ACTBP60709 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
ACTBP60709 AC092435.3-201ENST00000565538 3654 ntBASIC3.01□□□□□ -1.93
ACTBP60709 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.01□□□□□ -1.93
ACTBP60709 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ACTBP60709 AC010733.2-201ENST00000589496 5702 ntBASIC3.01□□□□□ -1.93
ACTBP60709 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.01□□□□□ -1.93
ACTBP60709 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ACTBP60709 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
ACTBP60709 DEFB109C-201ENST00000382575 264 ntBASIC3.01□□□□□ -1.93
ACTBP60709 DEFB109B-201ENST00000382656 264 ntBASIC3.01□□□□□ -1.93
ACTBP60709 RPL32P23-201ENST00000397237 405 ntBASIC3.01□□□□□ -1.93
ACTBP60709 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.01□□□□□ -1.93
ACTBP60709 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.01□□□□□ -1.93
ACTBP60709 AL591419.1-201ENST00000427423 339 ntBASIC3.01□□□□□ -1.93
ACTBP60709 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.01□□□□□ -1.93
ACTBP60709 ISCA1P2-201ENST00000438679 421 ntBASIC3.01□□□□□ -1.93
ACTBP60709 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.01□□□□□ -1.93
ACTBP60709 RPL7P59-201ENST00000447700 943 ntBASIC3.01□□□□□ -1.93
ACTBP60709 AC093392.2-201ENST00000450682 337 ntBASIC3.01□□□□□ -1.93
ACTBP60709 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.01□□□□□ -1.93
ACTBP60709 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.01□□□□□ -1.93
ACTBP60709 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ACTBP60709 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.01□□□□□ -1.93
ACTBP60709 AC021087.2-201ENST00000504656 1203 ntBASIC3.01□□□□□ -1.93
ACTBP60709 AC114967.1-201ENST00000504890 259 ntBASIC3.01□□□□□ -1.93
ACTBP60709 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
ACTBP60709 SCARNA14-201ENST00000516903 136 ntBASIC3.01□□□□□ -1.93
ACTBP60709 RNU6-711P-201ENST00000517255 106 ntBASIC3.01□□□□□ -1.93
ACTBP60709 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.01□□□□□ -1.93
ACTBP60709 AC084824.1-201ENST00000550917 1005 ntBASIC3.01□□□□□ -1.93
ACTBP60709 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.01□□□□□ -1.93
ACTBP60709 AC087499.8-201ENST00000578406 226 ntBASIC3.01□□□□□ -1.93
ACTBP60709 MIR5685-201ENST00000579080 79 ntBASIC3.01□□□□□ -1.93
ACTBP60709 YWHAQP7-201ENST00000603536 658 ntBASIC3.01□□□□□ -1.93
ACTBP60709 AC099676.1-201ENST00000608886 657 ntBASIC3.01□□□□□ -1.93
ACTBP60709 AL590240.3-201ENST00000621416 943 ntBASIC3.01□□□□□ -1.93
ACTBP60709 PABPC1P7-201ENST00000413177 1513 ntBASIC3.01□□□□□ -1.93
ACTBP60709 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.01□□□□□ -1.93
ACTBP60709 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
ACTBP60709 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ACTBP60709 MFSD8-233ENST00000641482 4860 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms