Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH11P55287 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH11P55287 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CDH11P55287 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CDH11P55287 OR5P1P-201ENST00000299512 925 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AC011155.1-201ENST00000316512 456 ntBASIC3.85□□□□□ -1.79
CDH11P55287 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH11P55287 OR5H2-201ENST00000355273 945 ntBASIC3.85□□□□□ -1.79
CDH11P55287 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CDH11P55287 RNU6-492P-201ENST00000363035 104 ntBASIC3.85□□□□□ -1.79
CDH11P55287 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH11P55287 RNU6-757P-201ENST00000410334 100 ntBASIC3.85□□□□□ -1.79
CDH11P55287 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH11P55287 RWDD4P2-201ENST00000426392 563 ntBASIC3.85□□□□□ -1.79
CDH11P55287 SETD6P1-201ENST00000444575 317 ntBASIC3.85□□□□□ -1.79
CDH11P55287 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH11P55287 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH11P55287 AC010307.1-201ENST00000467206 836 ntBASIC3.85□□□□□ -1.79
CDH11P55287 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CDH11P55287 AC103987.1-201ENST00000473394 348 ntBASIC3.85□□□□□ -1.79
CDH11P55287 RPS26P15-201ENST00000488067 348 ntBASIC3.85□□□□□ -1.79
CDH11P55287 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH11P55287 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH11P55287 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.85□□□□□ -1.79
CDH11P55287 SNORA48.10-201ENST00000516965 160 ntBASIC3.85□□□□□ -1.79
CDH11P55287 RNU6-1261P-201ENST00000517194 104 ntBASIC3.85□□□□□ -1.79
CDH11P55287 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH11P55287 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH11P55287 MTND2P26-201ENST00000528255 1029 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AC006064.5-201ENST00000541782 248 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH11P55287 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH11P55287 AC068446.3-201ENST00000555285 382 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH11P55287 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH11P55287 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH11P55287 AGGF1P6-201ENST00000569213 976 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AC020910.2-201ENST00000603635 610 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AC079587.1-201ENST00000603846 277 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AC018638.7-201ENST00000605836 1114 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AC064801.1-201ENST00000612025 407 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AC005332.6-201ENST00000613178 446 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AL021997.2-201ENST00000615674 271 ntBASIC3.85□□□□□ -1.79
CDH11P55287 AC007490.1-201ENST00000624321 703 ntBASIC3.85□□□□□ -1.79
CDH11P55287 CU459211.1-201ENST00000635667 749 ntBASIC3.85□□□□□ -1.79
CDH11P55287 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CDH11P55287 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH11P55287 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH11P55287 AC009951.1-201ENST00000623674 2614 ntBASIC3.85□□□□□ -1.79
CDH11P55287 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH11P55287 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH11P55287 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH11P55287 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH11P55287 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH11P55287 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
CDH11P55287 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CDH11P55287 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDH11P55287 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH11P55287 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH11P55287 RNA5SP175-201ENST00000364275 119 ntBASIC3.84□□□□□ -1.79
CDH11P55287 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH11P55287 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH11P55287 RNU6-444P-201ENST00000383988 108 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AL121978.1-201ENST00000402778 359 ntBASIC3.84□□□□□ -1.79
CDH11P55287 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CDH11P55287 RPL23AP47-201ENST00000408017 460 ntBASIC3.84□□□□□ -1.79
CDH11P55287 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH11P55287 RAP1BP1-201ENST00000412709 553 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AL391219.1-201ENST00000422570 483 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AL139421.1-201ENST00000423010 169 ntBASIC3.84□□□□□ -1.79
CDH11P55287 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH11P55287 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH11P55287 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH11P55287 AL050321.1-201ENST00000432363 400 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH11P55287 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH11P55287 MTND3P1-201ENST00000441336 220 ntBASIC3.84□□□□□ -1.79
CDH11P55287 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH11P55287 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH11P55287 MTCYBP11-201ENST00000447254 1109 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH11P55287 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH11P55287 RAD23BP3-201ENST00000454157 1152 ntBASIC3.84□□□□□ -1.79
CDH11P55287 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH11P55287 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH11P55287 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH11P55287 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH11P55287 SNORD116-26-201ENST00000516006 96 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AC027309.2-201ENST00000520566 192 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH11P55287 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH11P55287 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH11P55287 AL109766.1-201ENST00000555080 552 ntBASIC3.84□□□□□ -1.79
CDH11P55287 MTCYBP27-201ENST00000555160 670 ntBASIC3.84□□□□□ -1.79
CDH11P55287 PSMB7P1-201ENST00000556349 514 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AC138915.2-201ENST00000569776 97 ntBASIC3.84□□□□□ -1.79
CDH11P55287 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH11P55287 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH11P55287 OR4K7P-201ENST00000580232 945 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AC022069.1-201ENST00000582910 658 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms