Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MSH6P52701 RPL30P2-201ENST00000414021 291 ntBASIC4.36□□□□□ -1.71
MSH6P52701 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MSH6P52701 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.36□□□□□ -1.71
MSH6P52701 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH6P52701 NPM1P11-201ENST00000417106 855 ntBASIC4.36□□□□□ -1.71
MSH6P52701 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH6P52701 AC009263.1-201ENST00000441193 1239 ntBASIC4.36□□□□□ -1.71
MSH6P52701 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH6P52701 AC107015.1-201ENST00000466902 747 ntBASIC4.36□□□□□ -1.71
MSH6P52701 RPS4XP13-201ENST00000483219 789 ntBASIC4.36□□□□□ -1.71
MSH6P52701 PCBP2P3-201ENST00000509726 843 ntBASIC4.36□□□□□ -1.71
MSH6P52701 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH6P52701 AC114781.4-201ENST00000513707 639 ntBASIC4.36□□□□□ -1.71
MSH6P52701 RN7SKP272-201ENST00000516988 232 ntBASIC4.36□□□□□ -1.71
MSH6P52701 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.36□□□□□ -1.71
MSH6P52701 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH6P52701 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.36□□□□□ -1.71
MSH6P52701 uc_338.1-201ENST00000612113 180 ntBASIC4.36□□□□□ -1.71
MSH6P52701 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
MSH6P52701 AC090971.4-201ENST00000560291 1800 ntBASIC4.35□□□□□ -1.71
MSH6P52701 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
MSH6P52701 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MSH6P52701 OR13C3-201ENST00000374781 1108 ntBASIC4.35□□□□□ -1.71
MSH6P52701 RNA5SP508-201ENST00000411327 119 ntBASIC4.35□□□□□ -1.71
MSH6P52701 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH6P52701 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.35□□□□□ -1.71
MSH6P52701 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH6P52701 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
MSH6P52701 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH6P52701 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH6P52701 BNIP3P38-201ENST00000601117 544 ntBASIC4.35□□□□□ -1.71
MSH6P52701 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
MSH6P52701 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.35□□□□□ -1.71
MSH6P52701 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
MSH6P52701 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
MSH6P52701 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MSH6P52701 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
MSH6P52701 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MSH6P52701 AL450326.2-201ENST00000421913 1962 ntBASIC4.35□□□□□ -1.71
MSH6P52701 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
MSH6P52701 RPS4XP5-202ENST00000449995 1334 ntBASIC4.35□□□□□ -1.71
MSH6P52701 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MSH6P52701 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.34□□□□□ -1.71
MSH6P52701 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
MSH6P52701 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MSH6P52701 RSL24D1P4-201ENST00000400938 484 ntBASIC4.34□□□□□ -1.71
MSH6P52701 AL512430.2-201ENST00000406786 339 ntBASIC4.34□□□□□ -1.71
MSH6P52701 AC073136.2-201ENST00000417282 849 ntBASIC4.34□□□□□ -1.71
MSH6P52701 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.34□□□□□ -1.71
MSH6P52701 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.34□□□□□ -1.71
MSH6P52701 AL365396.1-201ENST00000430854 671 ntBASIC4.34□□□□□ -1.71
MSH6P52701 AC069540.1-201ENST00000446320 988 ntBASIC4.34□□□□□ -1.71
MSH6P52701 FDX1P2-201ENST00000450769 375 ntBASIC4.34□□□□□ -1.71
MSH6P52701 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.34□□□□□ -1.71
MSH6P52701 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.34□□□□□ -1.71
MSH6P52701 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MSH6P52701 SETP12-201ENST00000514068 805 ntBASIC4.34□□□□□ -1.71
MSH6P52701 AC107934.2-201ENST00000518653 310 ntBASIC4.34□□□□□ -1.71
MSH6P52701 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.34□□□□□ -1.71
MSH6P52701 AC106785.3-201ENST00000564064 847 ntBASIC4.34□□□□□ -1.71
MSH6P52701 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
MSH6P52701 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
MSH6P52701 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
MSH6P52701 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MSH6P52701 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.33□□□□□ -1.72
MSH6P52701 SNORD15B-201ENST00000384714 146 ntBASIC4.33□□□□□ -1.72
MSH6P52701 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.33□□□□□ -1.72
MSH6P52701 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MSH6P52701 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MSH6P52701 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.33□□□□□ -1.72
MSH6P52701 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.33□□□□□ -1.72
MSH6P52701 AC083906.5-201ENST00000503722 328 ntBASIC4.33□□□□□ -1.72
MSH6P52701 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.33□□□□□ -1.72
MSH6P52701 AC147055.1-201ENST00000509261 750 ntBASIC4.33□□□□□ -1.72
MSH6P52701 HIGD1AP13-201ENST00000509878 289 ntBASIC4.33□□□□□ -1.72
MSH6P52701 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MSH6P52701 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.33□□□□□ -1.72
MSH6P52701 MIR4769-201ENST00000584126 77 ntBASIC4.33□□□□□ -1.72
MSH6P52701 AL139286.1-201ENST00000604465 483 ntBASIC4.33□□□□□ -1.72
MSH6P52701 Z82195.1-201ENST00000604558 398 ntBASIC4.33□□□□□ -1.72
MSH6P52701 AC107905.1-201ENST00000616204 426 ntBASIC4.33□□□□□ -1.72
MSH6P52701 AP002967.1-201ENST00000624203 539 ntBASIC4.33□□□□□ -1.72
MSH6P52701 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.33□□□□□ -1.72
MSH6P52701 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
MSH6P52701 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MSH6P52701 HMGB3P18-201ENST00000406327 590 ntBASIC4.32□□□□□ -1.72
MSH6P52701 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.32□□□□□ -1.72
MSH6P52701 AL645937.1-202ENST00000421799 937 ntBASIC4.32□□□□□ -1.72
MSH6P52701 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.32□□□□□ -1.72
MSH6P52701 AC019097.1-201ENST00000424783 735 ntBASIC4.32□□□□□ -1.72
MSH6P52701 AC063976.3-201ENST00000426849 329 ntBASIC4.32□□□□□ -1.72
MSH6P52701 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH6P52701 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH6P52701 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.32□□□□□ -1.72
MSH6P52701 AC010095.1-201ENST00000443543 144 ntBASIC4.32□□□□□ -1.72
MSH6P52701 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH6P52701 MRPS31P2-201ENST00000451581 518 ntBASIC4.32□□□□□ -1.72
MSH6P52701 RPS4XP22-201ENST00000480755 780 ntBASIC4.32□□□□□ -1.72
MSH6P52701 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms