Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC011979.1-201ENST00000472300 483 ntBASIC3.73□□□□□ -1.81
SOX3P41225 AC110792.1-201ENST00000491826 472 ntBASIC3.73□□□□□ -1.81
SOX3P41225 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX3P41225 AC112673.1-201ENST00000513168 575 ntBASIC3.73□□□□□ -1.81
SOX3P41225 SOD1P3-201ENST00000518682 454 ntBASIC3.73□□□□□ -1.81
SOX3P41225 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.73□□□□□ -1.81
SOX3P41225 AC090819.1-201ENST00000523800 1111 ntBASIC3.73□□□□□ -1.81
SOX3P41225 AP001207.1-201ENST00000524051 481 ntBASIC3.73□□□□□ -1.81
SOX3P41225 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX3P41225 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX3P41225 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX3P41225 AC023050.2-201ENST00000544968 387 ntBASIC3.73□□□□□ -1.81
SOX3P41225 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX3P41225 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX3P41225 AC068446.3-201ENST00000555285 382 ntBASIC3.73□□□□□ -1.81
SOX3P41225 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.73□□□□□ -1.81
SOX3P41225 MIR4286-201ENST00000580651 93 ntBASIC3.73□□□□□ -1.81
SOX3P41225 AC025588.2-201ENST00000604851 466 ntBASIC3.73□□□□□ -1.81
SOX3P41225 AC069545.1-201ENST00000605671 358 ntBASIC3.73□□□□□ -1.81
SOX3P41225 AC107952.2-201ENST00000606048 486 ntBASIC3.73□□□□□ -1.81
SOX3P41225 AP000255.1-201ENST00000610276 676 ntBASIC3.73□□□□□ -1.81
SOX3P41225 AC087683.2-201ENST00000611384 326 ntBASIC3.73□□□□□ -1.81
SOX3P41225 AC009159.2-201ENST00000617603 606 ntBASIC3.73□□□□□ -1.81
SOX3P41225 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX3P41225 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
SOX3P41225 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX3P41225 AC007529.1-201ENST00000418574 2178 ntBASIC3.73□□□□□ -1.81
SOX3P41225 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX3P41225 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SOX3P41225 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX3P41225 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX3P41225 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX3P41225 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX3P41225 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
SOX3P41225 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX3P41225 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX3P41225 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
SOX3P41225 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX3P41225 NACA3P-201ENST00000359690 648 ntBASIC3.72□□□□□ -1.81
SOX3P41225 RNU6-582P-201ENST00000362989 107 ntBASIC3.72□□□□□ -1.81
SOX3P41225 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.72□□□□□ -1.81
SOX3P41225 AL139098.1-201ENST00000407291 389 ntBASIC3.72□□□□□ -1.81
SOX3P41225 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.72□□□□□ -1.81
SOX3P41225 ELOCP9-201ENST00000418624 239 ntBASIC3.72□□□□□ -1.81
SOX3P41225 MTCO2P21-201ENST00000419780 677 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.72□□□□□ -1.81
SOX3P41225 OR8F1P-201ENST00000425243 930 ntBASIC3.72□□□□□ -1.81
SOX3P41225 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.72□□□□□ -1.81
SOX3P41225 DPRXP1-201ENST00000426312 460 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.72□□□□□ -1.81
SOX3P41225 SEPT7P5-201ENST00000434048 306 ntBASIC3.72□□□□□ -1.81
SOX3P41225 TBCAP1-201ENST00000436520 327 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AL591719.1-201ENST00000444669 744 ntBASIC3.72□□□□□ -1.81
SOX3P41225 PTENP1-201ENST00000447117 1215 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX3P41225 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.72□□□□□ -1.81
SOX3P41225 NARSP2-201ENST00000518524 679 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX3P41225 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.72□□□□□ -1.81
SOX3P41225 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.72□□□□□ -1.81
SOX3P41225 LRRC34P1-201ENST00000542742 915 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.72□□□□□ -1.81
SOX3P41225 AADACP1-206ENST00000561502 1193 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AC106785.1-201ENST00000565935 262 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AC120057.2-201ENST00000571520 271 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AC022662.1-201ENST00000580252 331 ntBASIC3.72□□□□□ -1.81
SOX3P41225 MIR4512-201ENST00000583257 77 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AC061975.8-201ENST00000587058 721 ntBASIC3.72□□□□□ -1.81
SOX3P41225 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.72□□□□□ -1.81
SOX3P41225 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AC023158.2-201ENST00000614876 543 ntBASIC3.72□□□□□ -1.81
SOX3P41225 MIR6500-201ENST00000622700 86 ntBASIC3.72□□□□□ -1.81
SOX3P41225 AP002782.1-201ENST00000623107 614 ntBASIC3.72□□□□□ -1.81
SOX3P41225 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX3P41225 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX3P41225 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX3P41225 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SOX3P41225 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX3P41225 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SOX3P41225 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX3P41225 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SOX3P41225 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
SOX3P41225 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SOX3P41225 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX3P41225 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
SOX3P41225 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SOX3P41225 RNA5SP391-201ENST00000363456 119 ntBASIC3.71□□□□□ -1.82
SOX3P41225 RNU6-560P-201ENST00000364007 108 ntBASIC3.71□□□□□ -1.82
SOX3P41225 RN7SKP280-201ENST00000364196 304 ntBASIC3.71□□□□□ -1.82
SOX3P41225 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX3P41225 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SOX3P41225 AL450992.3-201ENST00000413192 568 ntBASIC3.71□□□□□ -1.82
SOX3P41225 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX3P41225 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX3P41225 AC009237.2-201ENST00000421358 284 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX3P41225 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX3P41225 AC233981.1-201ENST00000423224 461 ntBASIC3.71□□□□□ -1.82
SOX3P41225 RPL7P44-201ENST00000424827 742 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AC092447.3-201ENST00000426027 686 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms