Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL445523.1-201ENST00000451184 1362 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC13P31276 AP001148.1-201ENST00000624124 2359 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
HOXC13P31276 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC13P31276 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC13P31276 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC13P31276 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC13P31276 ZNF734P-201ENST00000419494 1534 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HOXC13P31276 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HOXC13P31276 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC13P31276 RAB9AP3-201ENST00000412737 573 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 OR51A3P-201ENST00000413596 924 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC009237.5-201ENST00000414271 501 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC068533.1-201ENST00000418542 415 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC13P31276 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC13P31276 AC007389.2-201ENST00000434630 306 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 RPS7P2-201ENST00000435134 607 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC13P31276 AC234064.1-201ENST00000436312 247 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 Z80107.1-201ENST00000436830 412 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 TPTE2P3-201ENST00000441562 1189 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXC13P31276 AL034418.1-201ENST00000448675 860 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 RAB9AP1-201ENST00000449393 573 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 RPL7L1P8-201ENST00000469911 741 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC078785.3-201ENST00000476607 425 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC13P31276 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC13P31276 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC13P31276 IFITM8P-201ENST00000522529 394 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC13P31276 MTCYBP41-201ENST00000528913 1123 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC13P31276 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC13P31276 AC069240.1-201ENST00000548774 375 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC023825.1-201ENST00000566704 1030 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC007599.1-201ENST00000568688 1174 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC13P31276 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC13P31276 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC13P31276 AC006116.7-201ENST00000590141 756 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC068790.5-201ENST00000602741 355 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 DPRXP5-201ENST00000604662 539 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AL451086.1-201ENST00000605596 223 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC090912.3-201ENST00000609775 533 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 AC124016.2-201ENST00000610058 665 ntBASIC4.28□□□□□ -1.72
HOXC13P31276 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC13P31276 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC13P31276 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC13P31276 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HOXC13P31276 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC13P31276 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HOXC13P31276 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC13P31276 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC13P31276 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC13P31276 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC13P31276 AC116667.1-201ENST00000604855 2072 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 SNORA63.1-201ENST00000362493 131 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC13P31276 MT-TC-201ENST00000387405 66 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HOXC13P31276 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC13P31276 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC13P31276 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC010881.1-201ENST00000433830 235 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC091564.1-201ENST00000464563 479 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 RN7SL585P-201ENST00000470538 280 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC006517.1-201ENST00000480485 328 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 AC005726.1-201ENST00000494679 427 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC13P31276 AC118282.2-201ENST00000508739 374 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC13P31276 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 OR5M7P-201ENST00000526140 972 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 AP003385.6-201ENST00000531603 374 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC107954.1-201ENST00000565906 727 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 AC005951.1-201ENST00000576706 485 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms