Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC105031.1-201ENST00000518550 476 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.42□□□□□ -1.54
CNGA1P29973 AC060788.1-201ENST00000521318 469 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.42□□□□□ -1.54
CNGA1P29973 PCMTD1P2-201ENST00000565017 355 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AC141257.3-201ENST00000572906 215 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.42□□□□□ -1.54
CNGA1P29973 RN7SL435P-201ENST00000584418 282 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AC107214.2-201ENST00000608204 634 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CNGA1P29973 AC022106.2-201ENST00000620114 757 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AC011944.2-201ENST00000624440 683 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AL022393.1-201ENST00000625142 1677 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 AL139811.1-201ENST00000424779 2299 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNGA1P29973 AL672167.1-205ENST00000641112 3080 ntBASIC5.42□□□□□ -1.54
CNGA1P29973 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNGA1P29973 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.42□□□□□ -1.54
CNGA1P29973 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.42□□□□□ -1.54
CNGA1P29973 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.42□□□□□ -1.54
CNGA1P29973 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNGA1P29973 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CNGA1P29973 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNGA1P29973 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNGA1P29973 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CNGA1P29973 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNGA1P29973 LINC01355-201ENST00000566551 5444 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CNGA1P29973 RNU4-44P-201ENST00000363050 141 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 SNORA73.1-201ENST00000363107 205 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 RNU1-82P-201ENST00000390851 165 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 RNA5SP345-201ENST00000410646 108 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.41□□□□□ -1.54
CNGA1P29973 AC007738.1-201ENST00000413892 348 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AC092647.1-201ENST00000420654 287 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AL512286.1-201ENST00000439244 400 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 CDC27P1-201ENST00000445384 715 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CNGA1P29973 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.41□□□□□ -1.54
CNGA1P29973 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.41□□□□□ -1.54
CNGA1P29973 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.41□□□□□ -1.54
CNGA1P29973 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.41□□□□□ -1.54
CNGA1P29973 Y_RNA.695-201ENST00000516715 107 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 RPL12P22-201ENST00000519073 490 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AP001781.1-201ENST00000530977 207 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CNGA1P29973 AC023161.2-201ENST00000551218 780 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.41□□□□□ -1.54
CNGA1P29973 GTF2IP22-201ENST00000554443 182 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.41□□□□□ -1.54
CNGA1P29973 RN7SL652P-201ENST00000577769 300 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 YWHAQP7-201ENST00000603536 658 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 RPL23AP92-201ENST00000603609 255 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AL121932.1-201ENST00000605542 214 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AL451064.1-201ENST00000607718 471 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AL391497.1-201ENST00000608671 547 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AL161637.1-201ENST00000622380 412 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AP000843.1-201ENST00000624880 701 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
CNGA1P29973 AL596275.2-204ENST00000641628 552 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AL596275.2-206ENST00000641957 626 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CNGA1P29973 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 AC008758.3-201ENST00000507003 1829 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CNGA1P29973 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNGA1P29973 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.41□□□□□ -1.54
CNGA1P29973 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.41□□□□□ -1.54
CNGA1P29973 AC097504.1-201ENST00000515103 2415 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CNGA1P29973 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CNGA1P29973 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CNGA1P29973 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CNGA1P29973 RNA5SP388-201ENST00000362584 119 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 RNU6-501P-201ENST00000364072 100 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 RNU6-730P-201ENST00000383954 104 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 RN7SKP263-201ENST00000411194 309 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.4□□□□□ -1.54
CNGA1P29973 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.4□□□□□ -1.54
CNGA1P29973 CYCSP46-201ENST00000423569 204 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.4□□□□□ -1.54
CNGA1P29973 AL035410.1-201ENST00000427409 427 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.4□□□□□ -1.54
CNGA1P29973 MTCO3P5-201ENST00000433620 714 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 RPL35AP21-201ENST00000437667 333 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 MTCO1P27-201ENST00000448269 226 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 PLGLA-201ENST00000465668 449 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.4□□□□□ -1.54
CNGA1P29973 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
CNGA1P29973 AC007016.1-201ENST00000512110 244 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms