Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC239868.2-201ENST00000564237 4527 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NFKB1P19838 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.94□□□□□ -1.46
NFKB1P19838 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
NFKB1P19838 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NFKB1P19838 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NFKB1P19838 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.94□□□□□ -1.46
NFKB1P19838 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NFKB1P19838 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
NFKB1P19838 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
NFKB1P19838 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
NFKB1P19838 MTCO1P7-201ENST00000419523 1542 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 AC090337.1-201ENST00000579651 2074 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.93□□□□□ -1.46
NFKB1P19838 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NFKB1P19838 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NFKB1P19838 AC097714.1-201ENST00000511272 1647 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 AC011933.2-201ENST00000578539 2790 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NFKB1P19838 HSPE1P11-201ENST00000339579 310 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 RPL32P3-201ENST00000359025 275 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 RNA5SP273-201ENST00000362484 113 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 Y_RNA.167-201ENST00000363735 109 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 RNU2-29P-201ENST00000410423 189 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 OR6C66P-201ENST00000414917 930 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NFKB1P19838 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NFKB1P19838 CRIP1P1-201ENST00000427567 185 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 FABP5P14-201ENST00000437273 393 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 AF228730.2-201ENST00000438784 848 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NFKB1P19838 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.93□□□□□ -1.46
NFKB1P19838 HMGB1P15-201ENST00000453854 435 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 AC104308.1-201ENST00000454621 333 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 TRBV26-201ENST00000456572 344 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 AC005229.2-201ENST00000456995 399 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 RPL30P15-201ENST00000457129 321 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.93□□□□□ -1.46
NFKB1P19838 RNU1-88P-201ENST00000459274 128 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.93□□□□□ -1.46
NFKB1P19838 AF213884.1-201ENST00000488102 463 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.93□□□□□ -1.46
NFKB1P19838 RNU6-764P-201ENST00000516396 105 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 RNU6-566P-201ENST00000516790 107 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.93□□□□□ -1.46
NFKB1P19838 IGLV3-30-201ENST00000524362 298 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 TRIM51DP-201ENST00000529746 596 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 AP000857.1-201ENST00000532151 543 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.93□□□□□ -1.46
NFKB1P19838 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.93□□□□□ -1.46
NFKB1P19838 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.93□□□□□ -1.46
NFKB1P19838 MIR4775-201ENST00000581168 75 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.93□□□□□ -1.46
NFKB1P19838 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.93□□□□□ -1.46
NFKB1P19838 AL513327.3-201ENST00000602618 469 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 AC008782.1-201ENST00000603386 430 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.93□□□□□ -1.46
NFKB1P19838 MIR7109-201ENST00000613748 65 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 AC073593.1-201ENST00000624500 411 ntBASIC5.93□□□□□ -1.46
NFKB1P19838 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NFKB1P19838 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.93□□□□□ -1.46
NFKB1P19838 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
NFKB1P19838 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.92□□□□□ -1.46
NFKB1P19838 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NFKB1P19838 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.92□□□□□ -1.46
NFKB1P19838 GTF2IP4-201ENST00000453092 2054 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 DHX40P1-201ENST00000588725 1412 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 AL137141.1-201ENST00000624622 4836 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.92□□□□□ -1.46
NFKB1P19838 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NFKB1P19838 MSL3P1-202ENST00000440028 1468 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 SNORA62.1-201ENST00000364287 154 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 RNU6-1032P-201ENST00000384100 107 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 RNU6-1207P-201ENST00000384343 107 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 Y_RNA.557-201ENST00000384680 107 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 AC092642.1-201ENST00000392417 425 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 MRPL42P3-201ENST00000401492 326 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
NFKB1P19838 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.92□□□□□ -1.46
NFKB1P19838 MCFD2P1-201ENST00000417812 300 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 AL590609.2-201ENST00000421430 368 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.92□□□□□ -1.46
NFKB1P19838 MTATP6P16-201ENST00000434543 526 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 PPIAP13-201ENST00000434706 478 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 AC108734.1-201ENST00000439549 399 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NFKB1P19838 MTCO3P10-201ENST00000455912 772 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 RN7SL170P-201ENST00000487098 295 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 RN7SL57P-201ENST00000493687 290 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.92□□□□□ -1.46
NFKB1P19838 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.92□□□□□ -1.46
NFKB1P19838 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NFKB1P19838 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.92□□□□□ -1.46
NFKB1P19838 AC128657.1-201ENST00000549459 145 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.92□□□□□ -1.46
NFKB1P19838 MIR4790-201ENST00000577799 79 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 AC053481.3-201ENST00000577881 843 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.92□□□□□ -1.46
NFKB1P19838 AC133104.2-201ENST00000615272 193 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms