Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SNRPA1P09661 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNRPA1P09661 Z99496.1-201ENST00000469424 1477 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SNRPA1P09661 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
SNRPA1P09661 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNRPA1P09661 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNRPA1P09661 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNRPA1P09661 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNRPA1P09661 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.32□□□□□ -1.56
SNRPA1P09661 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.32□□□□□ -1.56
SNRPA1P09661 RNU1-85P-201ENST00000364127 164 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 MIR195-201ENST00000385194 87 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 MIR16-1-201ENST00000385271 89 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SNRPA1P09661 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNRPA1P09661 MIR1271-201ENST00000408537 86 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.32□□□□□ -1.56
SNRPA1P09661 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.32□□□□□ -1.56
SNRPA1P09661 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 RPL7P2-201ENST00000427639 268 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AC022022.1-201ENST00000430304 178 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.32□□□□□ -1.56
SNRPA1P09661 Z95327.1-201ENST00000446082 482 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.32□□□□□ -1.56
SNRPA1P09661 RPL38P1-201ENST00000460914 211 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.32□□□□□ -1.56
SNRPA1P09661 RN7SL132P-201ENST00000478131 296 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.32□□□□□ -1.56
SNRPA1P09661 VPS26AP1-201ENST00000483197 979 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AC012158.1-204ENST00000483430 465 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 NPM1P41-201ENST00000512920 831 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AC022447.1-201ENST00000515358 464 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.32□□□□□ -1.56
SNRPA1P09661 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.32□□□□□ -1.56
SNRPA1P09661 AC060788.1-201ENST00000521318 469 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.32□□□□□ -1.56
SNRPA1P09661 AC007954.1-201ENST00000554198 494 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.32□□□□□ -1.56
SNRPA1P09661 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.32□□□□□ -1.56
SNRPA1P09661 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.32□□□□□ -1.56
SNRPA1P09661 ROCK1P1-201ENST00000573767 549 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AC022884.3-201ENST00000579571 248 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.32□□□□□ -1.56
SNRPA1P09661 MIR3611-201ENST00000584484 83 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AC022146.1-201ENST00000595307 847 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.32□□□□□ -1.56
SNRPA1P09661 AC107304.1-201ENST00000604229 296 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 AC245389.1-201ENST00000605141 529 ntBASIC5.32□□□□□ -1.56
SNRPA1P09661 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.32□□□□□ -1.56
SNRPA1P09661 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.32□□□□□ -1.56
SNRPA1P09661 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNRPA1P09661 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNRPA1P09661 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNRPA1P09661 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNRPA1P09661 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNRPA1P09661 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SNRPA1P09661 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNRPA1P09661 VDAC2P1-201ENST00000399358 958 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 RN7SKP159-201ENST00000410657 292 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.31□□□□□ -1.56
SNRPA1P09661 MTCYBP39-201ENST00000437562 491 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 RPS29P7-201ENST00000439662 171 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.31□□□□□ -1.56
SNRPA1P09661 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 AL589765.3-201ENST00000446084 462 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.31□□□□□ -1.56
SNRPA1P09661 AC079804.1-201ENST00000461922 436 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 RN7SL542P-201ENST00000467147 294 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 RN7SL817P-201ENST00000480777 288 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 ARL4AP1-201ENST00000503220 705 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 AC108145.1-201ENST00000503770 153 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.31□□□□□ -1.56
SNRPA1P09661 RNU6-1225P-201ENST00000516336 65 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.31□□□□□ -1.56
SNRPA1P09661 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.31□□□□□ -1.56
SNRPA1P09661 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.31□□□□□ -1.56
SNRPA1P09661 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.31□□□□□ -1.56
SNRPA1P09661 AC010546.1-201ENST00000569391 485 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 OR4K7P-201ENST00000580232 945 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 ZNF415P1-201ENST00000582279 1166 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.31□□□□□ -1.56
SNRPA1P09661 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.31□□□□□ -1.56
SNRPA1P09661 AC092354.2-201ENST00000607786 514 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 AL391497.1-201ENST00000608671 547 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 AL138721.1-201ENST00000616756 179 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 AL136981.2-201ENST00000617319 734 ntBASIC5.31□□□□□ -1.56
SNRPA1P09661 AC009878.1-201ENST00000621819 340 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms