Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS4BO75351 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AC083843.3-201ENST00000623679 2186 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS4BO75351 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS4BO75351 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS4BO75351 RNU5F-6P-201ENST00000362979 116 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 RNU1-83P-201ENST00000363426 164 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 RNA5SP505-201ENST00000364748 108 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS4BO75351 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 Y_RNA.516-201ENST00000384541 124 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 RNU6-441P-201ENST00000384545 106 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 OR6C69P-201ENST00000394268 893 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 RPS24P12-201ENST00000402084 394 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 RN7SKP56-201ENST00000410513 331 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 RPL6P29-201ENST00000414863 865 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS4BO75351 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS4BO75351 E2F6P2-201ENST00000420708 748 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 RPS27AP14-201ENST00000422868 454 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 AC112498.1-201ENST00000444401 332 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 RPS26P56-201ENST00000444468 240 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS4BO75351 MTCO3P2-201ENST00000457365 171 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS4BO75351 AC091153.1-201ENST00000466297 402 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AP000797.1-201ENST00000478870 387 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 NIP7P2-201ENST00000485801 544 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS4BO75351 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 AC113430.1-201ENST00000506872 718 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS4BO75351 AC093809.1-201ENST00000509155 340 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 COX6B1P5-201ENST00000509843 249 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS4BO75351 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 FABP5P5-201ENST00000515537 406 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 AL110118.1-201ENST00000553543 400 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS4BO75351 HSPE1P3-201ENST00000559254 309 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS4BO75351 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS4BO75351 AC091805.2-201ENST00000603848 235 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AC112187.2-201ENST00000604345 283 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 IMMP1LP1-201ENST00000605170 488 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AL008729.2-201ENST00000606393 473 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 AC116447.1-201ENST00000613153 453 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS4BO75351 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS4BO75351 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS4BO75351 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 MTND4P16-201ENST00000466108 1367 ntBASIC4.73□□□□□ -1.65
VPS4BO75351 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS4BO75351 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS4BO75351 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS4BO75351 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS4BO75351 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS4BO75351 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS4BO75351 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS4BO75351 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS4BO75351 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS4BO75351 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS4BO75351 AC092447.7-201ENST00000422212 1621 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC008758.3-201ENST00000507003 1829 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 DDX18P3-201ENST00000404856 2007 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 MAPK10-303ENST00000641324 3959 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
VPS4BO75351 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS4BO75351 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS4BO75351 OR10J6P-201ENST00000289731 930 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS4BO75351 AC079741.1-201ENST00000321498 212 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 Y_RNA.97-201ENST00000363094 102 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 RNU6-984P-201ENST00000363236 109 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 RN7SKP227-201ENST00000364445 330 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
VPS4BO75351 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VPS4BO75351 MIR649-201ENST00000384843 97 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms