Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 U4.5-201ENST00000617137 123 ntBASIC4.68□□□□□ -1.66
PROM1O43490 MIR8069-2-201ENST00000621412 86 ntBASIC4.68□□□□□ -1.66
PROM1O43490 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.68□□□□□ -1.66
PROM1O43490 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.68□□□□□ -1.66
PROM1O43490 AL139811.1-201ENST00000424779 2299 ntBASIC4.68□□□□□ -1.66
PROM1O43490 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.68□□□□□ -1.66
PROM1O43490 AC026951.1-201ENST00000559530 2459 ntBASIC4.68□□□□□ -1.66
PROM1O43490 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
PROM1O43490 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
PROM1O43490 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PROM1O43490 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.67□□□□□ -1.66
PROM1O43490 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.67□□□□□ -1.66
PROM1O43490 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 AC091046.3-201ENST00000631455 1574 ntBASIC4.67□□□□□ -1.66
PROM1O43490 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PROM1O43490 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PROM1O43490 SNORA40.3-201ENST00000390964 122 ntBASIC4.67□□□□□ -1.66
PROM1O43490 HMGN1P14-201ENST00000412459 517 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.67□□□□□ -1.66
PROM1O43490 AC083875.1-201ENST00000419509 405 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AL953862.1-201ENST00000423016 168 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AL360081.1-201ENST00000428299 555 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.67□□□□□ -1.66
PROM1O43490 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.67□□□□□ -1.66
PROM1O43490 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.67□□□□□ -1.66
PROM1O43490 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 RPS29P33-201ENST00000456717 146 ntBASIC4.67□□□□□ -1.66
PROM1O43490 RN7SL517P-201ENST00000462240 305 ntBASIC4.67□□□□□ -1.66
PROM1O43490 RN7SL738P-201ENST00000470264 297 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.67□□□□□ -1.66
PROM1O43490 AC013828.1-201ENST00000481845 158 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AC140172.1-201ENST00000502928 141 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AC108475.1-201ENST00000507880 950 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.67□□□□□ -1.66
PROM1O43490 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.67□□□□□ -1.66
PROM1O43490 AC022790.1-201ENST00000522872 204 ntBASIC4.67□□□□□ -1.66
PROM1O43490 DEFB131D-201ENST00000526803 184 ntBASIC4.67□□□□□ -1.66
PROM1O43490 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.67□□□□□ -1.66
PROM1O43490 OR6C73P-201ENST00000546432 358 ntBASIC4.67□□□□□ -1.66
PROM1O43490 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.67□□□□□ -1.66
PROM1O43490 RPS3AP4-201ENST00000555161 764 ntBASIC4.67□□□□□ -1.66
PROM1O43490 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.67□□□□□ -1.66
PROM1O43490 CYCSP2-201ENST00000558168 301 ntBASIC4.67□□□□□ -1.66
PROM1O43490 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.67□□□□□ -1.66
PROM1O43490 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.67□□□□□ -1.66
PROM1O43490 TPRKBP2-201ENST00000565969 475 ntBASIC4.67□□□□□ -1.66
PROM1O43490 MIR4697-201ENST00000582977 78 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.67□□□□□ -1.66
PROM1O43490 AC115085.1-201ENST00000588924 229 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AC115286.1-201ENST00000604298 434 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AC087783.2-201ENST00000605070 562 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AC069304.2-201ENST00000605154 435 ntBASIC4.67□□□□□ -1.66
PROM1O43490 MIR378J-201ENST00000611988 109 ntBASIC4.67□□□□□ -1.66
PROM1O43490 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.67□□□□□ -1.66
PROM1O43490 AC022031.1-201ENST00000585985 2593 ntBASIC4.67□□□□□ -1.66
PROM1O43490 MTND5P26-201ENST00000426018 1752 ntBASIC4.67□□□□□ -1.66
PROM1O43490 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PROM1O43490 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 SCN1A-220ENST00000641603 12506 ntBASIC4.67□□□□□ -1.66
PROM1O43490 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PROM1O43490 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PROM1O43490 AC074029.4-201ENST00000624796 1859 ntBASIC4.66□□□□□ -1.66
PROM1O43490 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PROM1O43490 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PROM1O43490 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PROM1O43490 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PROM1O43490 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PROM1O43490 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PROM1O43490 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PROM1O43490 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PROM1O43490 AL512646.1-201ENST00000269395 1077 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.66□□□□□ -1.66
PROM1O43490 SNORA51.8-201ENST00000384234 132 ntBASIC4.66□□□□□ -1.66
PROM1O43490 RNY3P14-201ENST00000384309 102 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AL450338.1-201ENST00000407987 512 ntBASIC4.66□□□□□ -1.66
PROM1O43490 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.66□□□□□ -1.66
PROM1O43490 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.66□□□□□ -1.66
PROM1O43490 RPS27AP14-201ENST00000422868 454 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AC245028.1-201ENST00000423259 256 ntBASIC4.66□□□□□ -1.66
PROM1O43490 RPL30P3-201ENST00000424262 333 ntBASIC4.66□□□□□ -1.66
PROM1O43490 VDAC1P6-201ENST00000430062 855 ntBASIC4.66□□□□□ -1.66
PROM1O43490 CEACAMP1-201ENST00000434624 1035 ntBASIC4.66□□□□□ -1.66
PROM1O43490 RPS26P40-201ENST00000435209 294 ntBASIC4.66□□□□□ -1.66
PROM1O43490 ACTR3P2-201ENST00000439585 1257 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AC244505.5-201ENST00000443639 207 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.66□□□□□ -1.66
PROM1O43490 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.66□□□□□ -1.66
PROM1O43490 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.66□□□□□ -1.66
PROM1O43490 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.66□□□□□ -1.66
PROM1O43490 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.66□□□□□ -1.66
PROM1O43490 AL445433.1-201ENST00000457507 257 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms