Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNU6-579P-201ENST00000516879 102 ntBASIC3.49□□□□□ -1.85
LSM1O15116 MIR2116-201ENST00000517221 80 ntBASIC3.49□□□□□ -1.85
LSM1O15116 AP001636.2-201ENST00000525517 696 ntBASIC3.49□□□□□ -1.85
LSM1O15116 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.49□□□□□ -1.85
LSM1O15116 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM1O15116 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.49□□□□□ -1.85
LSM1O15116 SERPINE4P-201ENST00000554978 281 ntBASIC3.49□□□□□ -1.85
LSM1O15116 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM1O15116 MIR5187-201ENST00000583479 76 ntBASIC3.49□□□□□ -1.85
LSM1O15116 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.49□□□□□ -1.85
LSM1O15116 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM1O15116 AL354798.1-201ENST00000622505 329 ntBASIC3.49□□□□□ -1.85
LSM1O15116 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LSM1O15116 RNA5SP196-201ENST00000625967 102 ntBASIC3.49□□□□□ -1.85
LSM1O15116 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM1O15116 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM1O15116 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM1O15116 AC046144.1-201ENST00000478559 1853 ntBASIC3.49□□□□□ -1.85
LSM1O15116 FAM35CP-201ENST00000554755 2470 ntBASIC3.49□□□□□ -1.85
LSM1O15116 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM1O15116 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM1O15116 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
LSM1O15116 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM1O15116 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM1O15116 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
LSM1O15116 AL122126.1-201ENST00000546905 1318 ntBASIC3.48□□□□□ -1.85
LSM1O15116 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM1O15116 SNORA7.2-201ENST00000364446 145 ntBASIC3.48□□□□□ -1.85
LSM1O15116 RNA5SP235-201ENST00000365411 114 ntBASIC3.48□□□□□ -1.85
LSM1O15116 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM1O15116 RNU6-883P-201ENST00000384597 107 ntBASIC3.48□□□□□ -1.85
LSM1O15116 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LSM1O15116 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM1O15116 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.48□□□□□ -1.85
LSM1O15116 RPL7P60-201ENST00000397636 735 ntBASIC3.48□□□□□ -1.85
LSM1O15116 SNORA11B-201ENST00000408175 129 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM1O15116 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM1O15116 C4BPAP2-201ENST00000428434 478 ntBASIC3.48□□□□□ -1.85
LSM1O15116 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.48□□□□□ -1.85
LSM1O15116 OR2B8P-201ENST00000432841 938 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.48□□□□□ -1.85
LSM1O15116 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM1O15116 AC010655.1-201ENST00000449336 292 ntBASIC3.48□□□□□ -1.85
LSM1O15116 MTND2P3-201ENST00000452458 470 ntBASIC3.48□□□□□ -1.85
LSM1O15116 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM1O15116 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM1O15116 AL133162.1-201ENST00000463228 453 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AC015724.1-201ENST00000478577 156 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AC108860.1-201ENST00000484521 383 ntBASIC3.48□□□□□ -1.85
LSM1O15116 FCF1P3-201ENST00000496394 590 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AL139099.1-201ENST00000497398 403 ntBASIC3.48□□□□□ -1.85
LSM1O15116 RPL7L1P13-201ENST00000511702 739 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.48□□□□□ -1.85
LSM1O15116 MTCO1P35-201ENST00000515270 228 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM1O15116 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.48□□□□□ -1.85
LSM1O15116 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM1O15116 PARP1P2-201ENST00000556806 195 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.48□□□□□ -1.85
LSM1O15116 SNRPGP15-201ENST00000600149 222 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AL451074.6-201ENST00000608512 729 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AC005344.1-201ENST00000613391 459 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AC083809.1-201ENST00000615051 472 ntBASIC3.48□□□□□ -1.85
LSM1O15116 MIR6875-201ENST00000617506 72 ntBASIC3.48□□□□□ -1.85
LSM1O15116 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM1O15116 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.48□□□□□ -1.85
LSM1O15116 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM1O15116 AP003400.6-201ENST00000624698 740 ntBASIC3.48□□□□□ -1.85
LSM1O15116 AL356118.1-201ENST00000635272 1078 ntBASIC3.48□□□□□ -1.85
LSM1O15116 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM1O15116 AC002546.1-201ENST00000588041 2504 ntBASIC3.48□□□□□ -1.85
LSM1O15116 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM1O15116 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM1O15116 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM1O15116 AP004289.2-201ENST00000444413 1457 ntBASIC3.47□□□□□ -1.85
LSM1O15116 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM1O15116 MTND5P11-201ENST00000511037 1812 ntBASIC3.47□□□□□ -1.85
LSM1O15116 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM1O15116 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM1O15116 OR52E6-202ENST00000379946 954 ntBASIC3.47□□□□□ -1.85
LSM1O15116 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM1O15116 SNORA51.12-201ENST00000384448 134 ntBASIC3.47□□□□□ -1.85
LSM1O15116 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LSM1O15116 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM1O15116 PPIAP31-201ENST00000405422 495 ntBASIC3.47□□□□□ -1.85
LSM1O15116 U3.39-201ENST00000408569 239 ntBASIC3.47□□□□□ -1.85
LSM1O15116 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM1O15116 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM1O15116 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.47□□□□□ -1.85
LSM1O15116 AL158825.1-201ENST00000414735 521 ntBASIC3.47□□□□□ -1.85
LSM1O15116 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.47□□□□□ -1.85
LSM1O15116 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM1O15116 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM1O15116 AC125238.1-201ENST00000448842 249 ntBASIC3.47□□□□□ -1.85
LSM1O15116 RN7SL442P-201ENST00000473804 320 ntBASIC3.47□□□□□ -1.85
LSM1O15116 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LSM1O15116 POU5F1P7-201ENST00000508759 541 ntBASIC3.47□□□□□ -1.85
LSM1O15116 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM1O15116 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms