Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SDCBPO00560 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.65□□□□□ -1.99
SDCBPO00560 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SDCBPO00560 RPS12P18-201ENST00000442381 270 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 RPS20P32-201ENST00000456044 356 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.65□□□□□ -1.99
SDCBPO00560 SNORA84-201ENST00000459229 133 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 AC110794.1-201ENST00000505816 425 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.65□□□□□ -1.99
SDCBPO00560 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.65□□□□□ -1.99
SDCBPO00560 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.65□□□□□ -1.99
SDCBPO00560 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.65□□□□□ -1.99
SDCBPO00560 ZNF192P1-203ENST00000565888 810 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 RN7SL339P-201ENST00000580597 296 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 MIR3158-1-201ENST00000583596 81 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.65□□□□□ -1.99
SDCBPO00560 NF1P5-201ENST00000588287 448 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.65□□□□□ -1.99
SDCBPO00560 uc_338.25-201ENST00000613756 156 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 AC006133.1-201ENST00000617106 264 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 AC119674.1-212ENST00000641155 993 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
SDCBPO00560 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SDCBPO00560 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SDCBPO00560 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.65□□□□□ -1.99
SDCBPO00560 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 AC021755.1-201ENST00000559747 1447 ntBASIC2.65□□□□□ -1.99
SDCBPO00560 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SDCBPO00560 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SDCBPO00560 AL049781.1-201ENST00000623195 3585 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.64□□□□□ -1.99
SDCBPO00560 RPL23AP57-201ENST00000332361 466 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 SNORA51.4-201ENST00000364993 124 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 RNA5SP167-201ENST00000365461 116 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 OR6K3-202ENST00000368146 996 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SDCBPO00560 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 RN7SKP58-201ENST00000411010 305 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 PRELID3BP11-201ENST00000414230 479 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 SDCBPP3-201ENST00000419629 891 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.64□□□□□ -1.99
SDCBPO00560 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.64□□□□□ -1.99
SDCBPO00560 MTCYBP21-201ENST00000443300 1113 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 HMGN2P21-201ENST00000447764 270 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 HMGB3P30-201ENST00000457863 606 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 RNU7-27P-201ENST00000459281 62 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
SDCBPO00560 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.64□□□□□ -1.99
SDCBPO00560 SNORA67.7-201ENST00000516664 135 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 DUXAP2-201ENST00000519198 589 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.64□□□□□ -1.99
SDCBPO00560 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.64□□□□□ -1.99
SDCBPO00560 AC055876.1-202ENST00000567053 138 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.64□□□□□ -1.99
SDCBPO00560 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.64□□□□□ -1.99
SDCBPO00560 AL355816.1-201ENST00000607951 118 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.64□□□□□ -1.99
SDCBPO00560 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.64□□□□□ -1.99
SDCBPO00560 MIR6798-201ENST00000612887 67 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.64□□□□□ -1.99
SDCBPO00560 AC119744.1-201ENST00000454746 1715 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 AC108206.1-201ENST00000570186 4159 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SDCBPO00560 RNF6P1-201ENST00000444889 1784 ntBASIC2.64□□□□□ -1.99
SDCBPO00560 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.64□□□□□ -1.99
SDCBPO00560 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
SDCBPO00560 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SDCBPO00560 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SDCBPO00560 AL353743.1-202ENST00000431724 1695 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AL353743.4-201ENST00000422653 1547 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SDCBPO00560 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.63□□□□□ -1.99
SDCBPO00560 AC096656.1-201ENST00000623826 1364 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.63□□□□□ -1.99
SDCBPO00560 OR1S2-201ENST00000302592 978 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 DYNLT3P1-201ENST00000378574 347 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 MIR449B-201ENST00000384995 97 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 SNORA48.8-201ENST00000391324 134 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 ATP5F1P3-201ENST00000397213 657 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AC110754.1-201ENST00000399740 601 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.63□□□□□ -1.99
SDCBPO00560 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.63□□□□□ -1.99
SDCBPO00560 AC004987.3-201ENST00000413879 771 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 BMS1P22-201ENST00000414726 313 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 NDUFB4P5-201ENST00000415445 361 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AC063979.1-201ENST00000415539 377 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.63□□□□□ -1.99
SDCBPO00560 AL050321.1-201ENST00000432363 400 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 UBE2V2P1-201ENST00000434717 398 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 SETP5-201ENST00000437270 562 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AC069540.1-201ENST00000446320 988 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 RPL5P13-201ENST00000462840 709 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 PRDX3P4-201ENST00000470828 747 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.63□□□□□ -1.99
SDCBPO00560 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.63□□□□□ -1.99
SDCBPO00560 AC078817.1-201ENST00000492623 435 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AP002812.1-201ENST00000495378 474 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.63□□□□□ -1.99
SDCBPO00560 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms