Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 BX664727.1-201ENST00000416024 466 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 HMGB1P16-201ENST00000447155 540 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AC097262.1-201ENST00000452559 548 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 FCF1P3-201ENST00000496394 590 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 OR5H3P-201ENST00000502817 919 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AC111193.1-201ENST00000504097 155 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 YPEL5P2-201ENST00000605553 359 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AL354976.1-201ENST00000613843 387 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 VN1R9P-201ENST00000614184 867 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 FRG1HP-204ENST00000617940 757 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AC253576.2-201ENST00000618815 580 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AL513302.2-201ENST00000562313 1842 ntBASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.63□□□□□ -1.83
SMIM28A0A1B0GU29 MTCO1P18-201ENST00000455518 1419 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 MTCO1P4-201ENST00000520516 1409 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 CR383658.2-201ENST00000547576 1525 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 MIR491-201ENST00000384877 84 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 RPL22P22-201ENST00000395439 379 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AL136116.1-201ENST00000403591 381 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AC011037.1-201ENST00000483964 558 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AC010285.3-201ENST00000511668 676 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 CR383656.14-201ENST00000551951 406 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 POLR2KP1-201ENST00000553226 168 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AC005476.1-201ENST00000554427 397 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 MIR3200-201ENST00000580767 85 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 RN7SL622P-201ENST00000585292 275 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 CKS1BP3-201ENST00000600888 237 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AL355816.1-201ENST00000607951 118 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AC245100.7-201ENST00000609678 442 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AC009452.1-201ENST00000640823 606 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AL133412.1-201ENST00000380194 2992 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 AL136964.1-201ENST00000622038 2990 ntBASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.62□□□□□ -1.83
SMIM28A0A1B0GU29 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 U3.19-201ENST00000390893 196 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 RPL30P3-201ENST00000424262 333 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AL512637.2-201ENST00000431287 1256 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AC068135.1-201ENST00000446164 246 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 Z75741.1-201ENST00000446793 314 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AL645939.1-201ENST00000453429 797 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 SETP6-201ENST00000479329 568 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 ACTG1P13-201ENST00000486987 1043 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 RPL7P38-201ENST00000488396 739 ntBASIC3.61□□□□□ -1.83
SMIM28A0A1B0GU29 AC023050.1-201ENST00000498198 304 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms