Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 RNU6-492P-201ENST00000363035 104 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 RNA5SP28-201ENST00000363841 119 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 SNORD116-23-201ENST00000384645 92 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 Y_RNA.553-201ENST00000384670 102 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL139098.1-201ENST00000407291 389 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 U3.35-201ENST00000408405 208 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 EIF4EP1-201ENST00000422311 642 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC099336.2-201ENST00000422457 254 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 RPL7AP25-201ENST00000423357 805 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 CKS1BP6-201ENST00000424932 240 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 RPS29P17-201ENST00000430795 166 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL513175.1-201ENST00000431492 780 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 RPL23AP35-201ENST00000451906 501 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 RPL37P3-201ENST00000456825 293 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC099560.2-201ENST00000457554 255 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC011352.3-201ENST00000505162 593 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC093281.2-201ENST00000510153 597 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL117351.2-201ENST00000513571 157 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 MTCO1P30-201ENST00000515244 580 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 RN7SKP21-201ENST00000516503 220 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC092851.1-201ENST00000535964 478 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC074050.1-201ENST00000563247 211 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 MIR3939-201ENST00000582614 106 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AC009313.2-201ENST00000417893 1941 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 AL359922.3-201ENST00000624779 1670 ntBASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX2IPQ9Y2D8 MTND5P24-201ENST00000438892 1767 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 CDR1-202ENST00000625883 1485 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AL031119.1-201ENST00000404707 1879 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AL672167.1-206ENST00000356293 943 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC004448.2-201ENST00000422360 586 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 USP9YP14-201ENST00000430663 563 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AL353597.2-202ENST00000434901 373 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC004938.1-201ENST00000438468 308 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 COX6CP2-201ENST00000444980 225 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 RPL21P126-201ENST00000470049 478 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC104689.1-201ENST00000473356 768 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 RN7SL817P-201ENST00000480777 288 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AL024509.2-201ENST00000493462 493 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC091965.2-201ENST00000512324 613 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 RNA5SP497-201ENST00000516081 97 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AP000873.5-201ENST00000533906 236 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC068714.1-201ENST00000559623 800 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC103792.1-201ENST00000603591 919 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AL139286.2-201ENST00000606838 396 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC068724.3-201ENST00000625906 87 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 OR52H1-202ENST00000641796 1061 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC099063.3-201ENST00000642066 185 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 AC012020.1-201ENST00000624541 1728 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms