Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC008015.1-201ENST00000555505 465 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC109446.2-201ENST00000567872 497 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC010620.1-201ENST00000601088 1102 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC245008.1-201ENST00000608123 476 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC009318.3-201ENST00000616916 503 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 CDRT1-208ENST00000630868 794 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC103706.2-201ENST00000638080 240 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 MTND5P31-201ENST00000419366 1374 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AL513185.3-201ENST00000433335 1300 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 SGO1P1-201ENST00000603525 1447 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC016588.2-201ENST00000632484 3021 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 RNU6-304P-201ENST00000364855 107 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 SKINT1L-201ENST00000401057 817 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AL590290.1-201ENST00000405336 380 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 MIR1251-201ENST00000408552 70 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 RNU4-72P-201ENST00000410754 173 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AL450992.3-201ENST00000413192 568 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC007435.1-201ENST00000421086 415 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 GTF2IP23-201ENST00000423746 351 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 UBE2V1P1-201ENST00000430836 445 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 MTND4P32-201ENST00000437189 1237 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 ELOCP8-201ENST00000439309 332 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC092473.1-201ENST00000441098 221 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC092809.1-201ENST00000441469 474 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 ELOCP15-201ENST00000442090 332 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC104306.1-201ENST00000449702 371 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC005229.2-201ENST00000456995 399 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC010468.1-201ENST00000461022 817 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 RPL23AP12-201ENST00000467573 473 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 MTCO1P47-201ENST00000523889 1271 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC135279.1-201ENST00000543493 504 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 DUXAP1-201ENST00000556632 463 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC087465.1-201ENST00000560574 245 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC090751.1-201ENST00000566966 267 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 MIR4286-201ENST00000580651 93 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 PIGPP4-201ENST00000584447 307 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC022916.3-201ENST00000592961 742 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC015726.1-201ENST00000602353 681 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 VIS1.1-201ENST00000610517 203 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AC022509.4-201ENST00000621404 572 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 AL049555.1-201ENST00000562834 1933 ntBASIC4.24□□□□□ -1.73
SIX4Q9UIU6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX4Q9UIU6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms