Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 Y_RNA.51-201ENST00000362725 102 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RNU4-24P-201ENST00000364565 139 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 SNORD116-4-201ENST00000384733 96 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 MIR93-201ENST00000385024 80 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AL590084.2-201ENST00000401481 382 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RNA5SP80-201ENST00000410475 111 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC008280.1-201ENST00000418851 412 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC098592.1-201ENST00000419352 333 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RPL7AP25-201ENST00000423357 805 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 SKP1P3-201ENST00000429280 487 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 USP9YP14-201ENST00000430663 563 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 MTND6P18-201ENST00000439477 513 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 MTND3P1-201ENST00000441336 220 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 MTCO2P7-201ENST00000446518 666 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AL034418.1-201ENST00000448675 860 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC097262.1-201ENST00000452559 548 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AL109741.2-201ENST00000455561 343 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RPL31P3-201ENST00000458430 332 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RPS6P4-201ENST00000494693 758 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 HSPE1P23-201ENST00000509838 286 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 XKRY-201ENST00000510392 1100 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RNA5SP154-201ENST00000516193 111 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC022790.1-201ENST00000522872 204 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AP000619.3-201ENST00000535634 1127 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AL109766.1-201ENST00000555080 552 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC068831.4-201ENST00000556118 109 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 MIR3160-1-201ENST00000577972 85 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC090616.2-202ENST00000584248 222 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AL390838.2-201ENST00000602394 274 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 BPIFA4P-203ENST00000603168 689 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC008638.3-201ENST00000603341 463 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC010201.1-201ENST00000605051 540 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC105129.3-201ENST00000605455 485 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AL359535.1-201ENST00000612100 1087 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RMST_9.1-201ENST00000619945 193 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RNU6-156P-201ENST00000621869 107 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC006065.6-201ENST00000625201 545 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 AC139769.1-204ENST00000472297 1931 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 RNU6-492P-201ENST00000363035 104 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 Y_RNA.201-201ENST00000364052 96 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 RNA5SP513-201ENST00000364648 118 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 MTCO3P31-201ENST00000405526 789 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 NRBF2P2-201ENST00000413087 861 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 AL136133.1-201ENST00000413694 376 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 RAD23BP1-201ENST00000421404 1227 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 AL139421.1-201ENST00000423010 169 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 AL138785.1-201ENST00000425821 331 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 AC234781.2-201ENST00000426370 994 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 RPS29P17-201ENST00000430795 166 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 USP9YP31-201ENST00000431405 881 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 ELOCP8-201ENST00000439309 332 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 ELOCP15-201ENST00000442090 332 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 PPBPP1-201ENST00000510807 373 ntBASIC4.44□□□□□ -1.7
NCKIPSDQ9NZQ3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms