Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 SLC31A1P1-201ENST00000451221 567 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 RPL6P9-201ENST00000466502 859 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 RPS4XP13-201ENST00000483219 789 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 RPL31P13-201ENST00000484151 370 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 MTCO1P31-201ENST00000506355 492 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 FCF1P8-201ENST00000510322 597 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC108157.1-201ENST00000510511 539 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 OR5B10P-201ENST00000532869 642 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AP000919.1-202ENST00000581139 1264 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 MIR3922-201ENST00000585192 84 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC008507.1-201ENST00000587506 734 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AL392112.1-201ENST00000605115 829 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC008121.2-201ENST00000614647 523 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 PLCE1P1-201ENST00000622094 305 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AL392088.2-201ENST00000637607 285 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AC007496.3-201ENST00000624987 3443 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 SKINT1L-201ENST00000401057 817 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 MTCO3P31-201ENST00000405526 789 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 EI24P1-201ENST00000416584 867 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 ETF1P3-201ENST00000430422 1160 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 MTCO1P43-201ENST00000431831 488 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 NCOR1P1-202ENST00000486162 291 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 RPL21P13-201ENST00000488305 481 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AC111193.1-201ENST00000504097 155 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 IGKV2-36-201ENST00000519999 223 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AP002812.4-201ENST00000532139 286 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 SUMO2P14-201ENST00000604488 293 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AC015802.5-201ENST00000607478 399 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 U6.48-201ENST00000618523 106 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AL356863.1-201ENST00000623378 1080 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 MIR4496-201ENST00000635896 61 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 MTND4P31-201ENST00000425607 1343 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TREX1Q9NSU2 GTF2H2B-203ENST00000508065 1432 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AC021755.1-201ENST00000559747 1447 ntBASIC3.36□□□□□ -1.87
TREX1Q9NSU2 AL049781.1-201ENST00000623195 3585 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 DNAJC19P6-201ENST00000401853 280 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC010385.1-201ENST00000412374 256 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 RPS7P13-201ENST00000413955 498 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC234782.4-201ENST00000417646 1048 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC091286.1-201ENST00000431233 461 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 KCTD10P1-201ENST00000434203 625 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 HMGB1P45-201ENST00000435986 653 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 HMGB1P12-201ENST00000438594 598 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 ATP5C1P1-201ENST00000441945 895 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AP000893.1-201ENST00000474462 794 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC090071.1-201ENST00000507713 644 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC005351.1-201ENST00000511152 786 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms