Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 ELL2P4-201ENST00000446870 1376 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 ZNF37BP-203ENST00000452306 1352 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AL359893.1-201ENST00000447628 1580 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 MIR30E-201ENST00000362104 92 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 EI24P2-201ENST00000397776 1076 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 SNORA3.3-201ENST00000408712 125 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 RPS7P13-201ENST00000413955 498 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC073310.1-201ENST00000423226 1033 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 MORF4L1P7-201ENST00000426038 703 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 MTCO1P43-201ENST00000431831 488 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 UBE2V1P5-201ENST00000440070 405 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AL662791.1-201ENST00000441992 928 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC004865.1-201ENST00000442276 1003 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 SETD6P1-201ENST00000444575 317 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 RPL21P104-201ENST00000464143 478 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 RN7SL442P-201ENST00000473804 320 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC008011.1-201ENST00000545989 227 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC007566.2-201ENST00000603642 413 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC090912.3-201ENST00000609775 533 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC006023.2-201ENST00000609916 167 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC005156.1-201ENST00000613371 573 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC005344.1-201ENST00000613391 459 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AL356490.1-201ENST00000623079 479 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC112200.1-201ENST00000625015 234 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AC092608.3-201ENST00000625017 386 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 MTCO1P18-201ENST00000455518 1419 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 AP004289.2-201ENST00000444413 1457 ntBASIC3.35□□□□□ -1.87
CCNB1IP1Q9NPC3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC005183.1-201ENST00000603687 1979 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 RNU6-600P-201ENST00000362524 99 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 RNU6-213P-201ENST00000384051 104 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 RNA5SP293-201ENST00000410527 113 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 TATDN1P1-201ENST00000414123 891 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 TOMM22P1-201ENST00000418578 312 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 NEK4P1-201ENST00000433383 879 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 RPS15AP29-201ENST00000445539 400 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 NUTF2P7-201ENST00000453086 375 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 RPS27P29-201ENST00000463110 252 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 VN1R17P-201ENST00000472048 1090 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC007688.1-201ENST00000475592 759 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC015724.1-201ENST00000478577 156 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 RPL23AP44-201ENST00000482216 473 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 RPL23AP55-201ENST00000498163 452 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 RNU2-27P-201ENST00000516185 142 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms