Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC055839.1-201ENST00000634467 498 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC099063.3-201ENST00000642066 185 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC090971.4-201ENST00000560291 1800 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC105074.1-201ENST00000623380 3095 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 RNU4-21P-201ENST00000362802 126 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 RNU6-251P-201ENST00000363235 104 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 RNU6-115P-201ENST00000364310 107 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 RNU4-75P-201ENST00000364621 146 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 SNORA71.2-201ENST00000364941 134 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 MIR659-201ENST00000384963 97 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AL450338.1-201ENST00000407987 512 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC062016.2-201ENST00000420950 676 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC006366.1-201ENST00000422002 759 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 PDSS1P1-201ENST00000422953 1114 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 RPL12P34-201ENST00000424532 479 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 MTCYBP39-201ENST00000437562 491 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 RPL23AP43-201ENST00000446445 471 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AP000936.2-201ENST00000447151 681 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 OR6C5P-201ENST00000452388 923 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 MTCO3P11-201ENST00000455103 774 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 RPS15AP1-201ENST00000457423 391 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC104685.1-201ENST00000502445 371 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 MTND4P2-201ENST00000507767 1203 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 HMGB1P28-201ENST00000507778 552 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 KRT19P6-201ENST00000510983 209 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC093840.1-201ENST00000511599 336 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC027309.2-201ENST00000520566 192 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 SMARCE1P4-201ENST00000523647 241 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC069061.3-201ENST00000582254 823 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC110743.1-201ENST00000584870 478 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 RPL12P25-202ENST00000598100 674 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC119751.7-201ENST00000600494 245 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC073544.2-201ENST00000601155 540 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC103591.3-201ENST00000608684 209 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AC092184.1-201ENST00000625042 715 ntBASIC4.63□□□□□ -1.67
USP29Q9HBJ7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP29Q9HBJ7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC009951.1-201ENST00000623674 2614 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC139769.1-204ENST00000472297 1931 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC108467.2-201ENST00000617640 1597 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 RNU1-108P-201ENST00000362556 161 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 RN7SKP227-201ENST00000364445 330 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 RNU6-146P-201ENST00000384602 108 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 MIR1284-201ENST00000408337 120 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 TPMTP3-201ENST00000411928 735 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 RPL7P8-201ENST00000411964 730 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 UQCRBP1-201ENST00000421129 336 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AL158073.1-201ENST00000426848 1104 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 RPL12P46-201ENST00000436610 195 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC241584.1-201ENST00000438469 1241 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms