Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 OR5J1P-201ENST00000313544 939 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 RN7SKP162-201ENST00000363605 345 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 SNORD3H-201ENST00000384486 214 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 Y_RNA.604-201ENST00000410574 102 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 OR6E1P-201ENST00000414424 923 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 NANOGP10-201ENST00000453325 895 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 RPL32P33-201ENST00000487023 394 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 RNU7-51P-201ENST00000516560 62 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 Y_RNA.704-201ENST00000516851 102 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 DEFB108D-201ENST00000527787 222 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AC128657.1-201ENST00000549459 145 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AL121603.1-201ENST00000553815 142 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AL359212.1-201ENST00000556608 614 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 H3F3BP2-201ENST00000583907 357 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 OR7E18P-201ENST00000592589 702 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AP002360.4-201ENST00000606980 481 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 MAPK10-338ENST00000641647 3362 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 AC138915.3-201ENST00000562908 1389 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 SRRM1P3-201ENST00000426911 2678 ntBASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC010928.1-201ENST00000592477 1447 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC083843.2-201ENST00000568248 6253 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AL136964.1-201ENST00000622038 2990 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC025470.1-201ENST00000510053 2032 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 RNU5E-8P-201ENST00000363502 116 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 RNU6-877P-201ENST00000383868 107 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AL109755.1-201ENST00000401791 649 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 RN7SKP159-201ENST00000410657 292 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 Z93019.1-201ENST00000416450 973 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 RPL23AP38-201ENST00000423801 469 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 MTATP6P23-201ENST00000440153 476 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AL163193.1-201ENST00000444895 788 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC005008.1-201ENST00000456151 612 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC007537.2-201ENST00000472093 511 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC008638.1-201ENST00000506035 866 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 MTND1P35-201ENST00000526739 508 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AP003072.2-201ENST00000527756 676 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC015720.2-201ENST00000567709 334 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 RPL12P25-202ENST00000598100 674 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC012669.1-201ENST00000603209 283 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC079395.2-201ENST00000610982 737 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 MIR1321-201ENST00000637766 79 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC074029.4-201ENST00000624796 1859 ntBASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.25□□□□□ -1.41
TRAIPQ9BWF2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 RNA5SP30-201ENST00000365552 115 ntBASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 SNORA51.8-201ENST00000384234 132 ntBASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 AC099677.1-201ENST00000420575 175 ntBASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 RPL7P54-201ENST00000438336 674 ntBASIC6.24□□□□□ -1.41
TRAIPQ9BWF2 BNIP3P2-201ENST00000441221 577 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms