Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC011276.1-201ENST00000469688 323 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC010285.1-201ENST00000470580 392 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC022034.3-201ENST00000471393 478 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX3Q99909 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX3Q99909 AC113420.1-201ENST00000507903 571 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX3Q99909 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX3Q99909 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.63□□□□□ -1.83
SSX3Q99909 AP000790.1-201ENST00000528891 737 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC109635.4-202ENST00000531666 412 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX3Q99909 LSM6P2-201ENST00000552208 177 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.63□□□□□ -1.83
SSX3Q99909 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSX3Q99909 MIR4697-201ENST00000582977 78 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX3Q99909 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSX3Q99909 AC006338.2-201ENST00000616864 791 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SSX3Q99909 AC006065.6-201ENST00000625201 545 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX3Q99909 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSX3Q99909 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSX3Q99909 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SSX3Q99909 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSX3Q99909 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX3Q99909 AC126755.2-208ENST00000327792 462 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC138969.1-213ENST00000331436 462 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 RNU6-989P-201ENST00000362756 107 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 RNU6-251P-201ENST00000363235 104 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 RNA5SP235-201ENST00000365411 114 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 RNU6-1181P-201ENST00000384191 106 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX3Q99909 TMSB10P2-201ENST00000416049 131 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX3Q99909 Z75741.2-201ENST00000417272 1167 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.62□□□□□ -1.83
SSX3Q99909 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX3Q99909 AC062016.2-201ENST00000420950 676 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX3Q99909 MTCO3P1-205ENST00000422088 832 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AL592293.2-201ENST00000422292 996 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 HSFY1P1-201ENST00000423928 1178 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX3Q99909 AC093155.1-201ENST00000440164 826 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX3Q99909 AL031313.1-201ENST00000448435 256 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC112492.1-201ENST00000449607 712 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SSX3Q99909 AL136097.1-201ENST00000456945 913 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC010301.1-201ENST00000473936 355 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC078785.3-201ENST00000476607 425 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX3Q99909 AC026979.1-201ENST00000492525 396 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 UBE2V1P12-201ENST00000503954 474 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSX3Q99909 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX3Q99909 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX3Q99909 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX3Q99909 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX3Q99909 MTCYBP27-201ENST00000555160 670 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX3Q99909 MIR3912-201ENST00000577566 105 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX3Q99909 AC091178.1-203ENST00000584586 279 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.62□□□□□ -1.83
SSX3Q99909 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.62□□□□□ -1.83
SSX3Q99909 AL445423.1-201ENST00000609941 536 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX3Q99909 AC026634.1-201ENST00000634369 198 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSX3Q99909 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSX3Q99909 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSX3Q99909 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.62□□□□□ -1.83
SSX3Q99909 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSX3Q99909 FAM91A3P-201ENST00000456826 2544 ntBASIC3.62□□□□□ -1.83
SSX3Q99909 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSX3Q99909 AP005901.5-201ENST00000545779 1796 ntBASIC3.61□□□□□ -1.83
SSX3Q99909 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SSX3Q99909 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSX3Q99909 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSX3Q99909 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSX3Q99909 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
SSX3Q99909 RNU1-15P-201ENST00000353977 144 ntBASIC3.61□□□□□ -1.83
SSX3Q99909 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SSX3Q99909 RNA5SP509-201ENST00000364577 119 ntBASIC3.61□□□□□ -1.83
SSX3Q99909 RNU6-761P-201ENST00000384148 107 ntBASIC3.61□□□□□ -1.83
SSX3Q99909 SNORD65.1-201ENST00000390889 71 ntBASIC3.61□□□□□ -1.83
SSX3Q99909 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSX3Q99909 AL049693.1-201ENST00000402760 611 ntBASIC3.61□□□□□ -1.83
SSX3Q99909 FCF1P5-201ENST00000406490 482 ntBASIC3.61□□□□□ -1.83
SSX3Q99909 AL023807.1-201ENST00000407932 359 ntBASIC3.61□□□□□ -1.83
SSX3Q99909 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.61□□□□□ -1.83
SSX3Q99909 RNU4-25P-201ENST00000410569 230 ntBASIC3.61□□□□□ -1.83
SSX3Q99909 SNRPFP1-201ENST00000414761 252 ntBASIC3.61□□□□□ -1.83
SSX3Q99909 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX3Q99909 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX3Q99909 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSX3Q99909 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 245.1 ms