Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 SNX5P1-201ENST00000505757 1041 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC010306.1-201ENST00000523223 1117 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 CIR1P1-201ENST00000524055 1133 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL21A1Q96P44 AL389895.1-201ENST00000554127 252 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 MIR3944-201ENST00000581277 108 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 BNIP3P38-201ENST00000601117 544 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC006254.3-201ENST00000603353 884 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC135178.6-201ENST00000605314 398 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AL355802.4-201ENST00000607635 548 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AP001033.2-201ENST00000609701 1003 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 MIR6075-201ENST00000620782 95 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC039056.2-201ENST00000622261 511 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 C2orf27A-204ENST00000623058 969 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC004777.1-201ENST00000624317 287 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL21A1Q96P44 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL21A1Q96P44 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL21A1Q96P44 SAGE4P-201ENST00000442271 3381 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AC068647.1-201ENST00000489539 2265 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 MIR30E-201ENST00000362104 92 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 SNORD46.1-201ENST00000364139 104 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 AIMP1P1-201ENST00000418670 937 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 SDCBPP2-201ENST00000424643 885 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 USP9YP31-201ENST00000431405 881 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AL513321.1-201ENST00000441175 761 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 RPS27P5-201ENST00000444247 244 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 RPS15AP29-201ENST00000445539 400 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AC069540.1-201ENST00000446320 988 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 TRBV8-2-201ENST00000475637 270 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 RN7SKP234-201ENST00000517173 224 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL21A1Q96P44 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 GTF2IP22-201ENST00000554443 182 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AC025918.2-201ENST00000558683 763 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 AL845331.3-202ENST00000562856 261 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 MIR4444-1-201ENST00000581696 74 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 MIR4444-2-201ENST00000584390 74 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AC069304.3-201ENST00000603938 1084 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AC010591.1-201ENST00000603941 649 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AL450489.1-201ENST00000612071 468 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AC020658.4-201ENST00000613987 684 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AL356490.1-201ENST00000623079 479 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 AC112200.1-201ENST00000625015 234 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL21A1Q96P44 USP8P1-201ENST00000494673 3183 ntBASIC3.32□□□□□ -1.88
COL21A1Q96P44 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL21A1Q96P44 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL21A1Q96P44 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
COL21A1Q96P44 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL21A1Q96P44 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 AC090337.1-201ENST00000579651 2074 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL21A1Q96P44 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL21A1Q96P44 SNORD9-201ENST00000362566 104 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 RNU6-356P-201ENST00000384140 107 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 SKINT1L-201ENST00000401057 817 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 MTATP6P31-201ENST00000406985 692 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 RPS20P25-201ENST00000412447 352 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 AC068533.1-201ENST00000418542 415 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 ARL5AP2-201ENST00000444698 533 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 RPS4XP2-201ENST00000458402 793 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 snoU13.24-201ENST00000458998 104 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 RN7SL442P-201ENST00000473804 320 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 AL035404.1-201ENST00000497982 568 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 RN7SKP283-201ENST00000517197 270 ntBASIC3.31□□□□□ -1.88
COL21A1Q96P44 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.31□□□□□ -1.88
COL21A1Q96P44 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms