Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 LINC01963-201ENST00000562038 3148 ntBASIC5.16□□□□□ -1.58
NUP43Q8NFH3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUP43Q8NFH3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NUP43Q8NFH3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.15□□□□□ -1.58
NUP43Q8NFH3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
NUP43Q8NFH3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NUP43Q8NFH3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
NUP43Q8NFH3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NUP43Q8NFH3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
NUP43Q8NFH3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NUP43Q8NFH3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 RNU6-1097P-201ENST00000363586 107 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 SNORA51.6-201ENST00000384151 125 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 MIR606-201ENST00000384851 96 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 SNORA17A-201ENST00000391185 133 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC016769.3-201ENST00000396562 315 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AL133384.1-201ENST00000412744 351 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 ATP5JP1-201ENST00000431631 322 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 GPR143P-201ENST00000434155 205 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 OR6D1P-201ENST00000436165 939 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 IFNA20P-201ENST00000436840 528 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 Z80107.2-201ENST00000445127 392 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 EIF4EP3-201ENST00000498782 656 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 RPL38P4-201ENST00000502376 214 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC091912.1-201ENST00000511351 248 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 SNORD46.2-201ENST00000516021 102 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 Y_RNA.691-201ENST00000516611 103 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 BTF3P12-201ENST00000519620 469 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 SUB1P1-201ENST00000524415 382 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AL049872.1-201ENST00000556323 322 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC007151.1-201ENST00000572774 483 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC008521.2-201ENST00000591021 259 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC008638.3-201ENST00000603341 463 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AL355472.4-201ENST00000610233 626 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 RNA5SP439-201ENST00000617595 124 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC068831.8-201ENST00000620171 435 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 uc_338.7-201ENST00000621834 124 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC018628.1-201ENST00000624147 3819 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 SNORA17.5-201ENST00000630429 132 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AL138820.1-201ENST00000617901 5305 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC006020.1-201ENST00000420179 1854 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 AC092162.3-201ENST00000624511 1624 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 MTND4P35-201ENST00000604257 1375 ntBASIC5.15□□□□□ -1.59
NUP43Q8NFH3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUP43Q8NFH3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 AC107081.3-201ENST00000612715 2034 ntBASIC5.14□□□□□ -1.59
NUP43Q8NFH3 AL022311.1-201ENST00000623726 19416 ntBASIC5.14□□□□□ -1.59
NUP43Q8NFH3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 AL592429.1-201ENST00000403909 1473 ntBASIC5.14□□□□□ -1.59
NUP43Q8NFH3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 NACAP2-201ENST00000318548 624 ntBASIC5.14□□□□□ -1.59
NUP43Q8NFH3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NUP43Q8NFH3 RNA5SP46-201ENST00000362370 120 ntBASIC5.14□□□□□ -1.59
NUP43Q8NFH3 RNU1-85P-201ENST00000364127 164 ntBASIC5.14□□□□□ -1.59
NUP43Q8NFH3 RNA5SP510-201ENST00000364697 99 ntBASIC5.14□□□□□ -1.59
NUP43Q8NFH3 SNORA32.2-201ENST00000384049 122 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms