Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC009812.2-201ENST00000517657 457 ntBASIC3.84□□□□□ -1.79
RTL9Q8NET4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.84□□□□□ -1.79
RTL9Q8NET4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.84□□□□□ -1.79
RTL9Q8NET4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.84□□□□□ -1.79
RTL9Q8NET4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.84□□□□□ -1.79
RTL9Q8NET4 AL390838.2-201ENST00000602394 274 ntBASIC3.84□□□□□ -1.79
RTL9Q8NET4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
RTL9Q8NET4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTL9Q8NET4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTL9Q8NET4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RTL9Q8NET4 AL365361.1-201ENST00000566942 3481 ntBASIC3.83□□□□□ -1.8
RTL9Q8NET4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.83□□□□□ -1.8
RTL9Q8NET4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTL9Q8NET4 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTL9Q8NET4 NACA3P-201ENST00000359690 648 ntBASIC3.83□□□□□ -1.8
RTL9Q8NET4 RNU6-301P-201ENST00000384277 107 ntBASIC3.83□□□□□ -1.8
RTL9Q8NET4 RN7SKP285-201ENST00000410137 318 ntBASIC3.83□□□□□ -1.8
RTL9Q8NET4 HMGN1P18-201ENST00000457642 277 ntBASIC3.83□□□□□ -1.8
RTL9Q8NET4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.83□□□□□ -1.8
RTL9Q8NET4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.83□□□□□ -1.8
RTL9Q8NET4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.83□□□□□ -1.8
RTL9Q8NET4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.83□□□□□ -1.8
RTL9Q8NET4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.83□□□□□ -1.8
RTL9Q8NET4 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.83□□□□□ -1.8
RTL9Q8NET4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.83□□□□□ -1.8
RTL9Q8NET4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTL9Q8NET4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTL9Q8NET4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTL9Q8NET4 AL021368.2-201ENST00000606125 5352 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTL9Q8NET4 RNU1-75P-201ENST00000347264 129 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 MIR449A-201ENST00000362113 91 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 SNORA48.8-201ENST00000391324 134 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 AL513175.1-201ENST00000431492 780 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.82□□□□□ -1.8
RTL9Q8NET4 RPS12P18-201ENST00000442381 270 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 AC005002.1-201ENST00000447458 540 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 CYCSP20-201ENST00000473154 315 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.82□□□□□ -1.8
RTL9Q8NET4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.82□□□□□ -1.8
RTL9Q8NET4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTL9Q8NET4 AC021733.2-201ENST00000518830 497 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 AC027309.2-201ENST00000520566 192 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 AC087276.1-201ENST00000529659 480 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTL9Q8NET4 U7.8-201ENST00000619968 63 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.82□□□□□ -1.8
RTL9Q8NET4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.82□□□□□ -1.8
RTL9Q8NET4 AC132825.8-201ENST00000640783 297 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 AP001486.2-201ENST00000561652 5113 ntBASIC3.82□□□□□ -1.8
RTL9Q8NET4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.82□□□□□ -1.8
RTL9Q8NET4 AC004944.1-201ENST00000517807 3059 ntBASIC3.81□□□□□ -1.8
RTL9Q8NET4 AL592437.2-201ENST00000421655 2434 ntBASIC3.81□□□□□ -1.8
RTL9Q8NET4 OR5J1P-201ENST00000313544 939 ntBASIC3.81□□□□□ -1.8
RTL9Q8NET4 SNORA71.1-201ENST00000364523 117 ntBASIC3.81□□□□□ -1.8
RTL9Q8NET4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.81□□□□□ -1.8
RTL9Q8NET4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTL9Q8NET4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTL9Q8NET4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RTL9Q8NET4 SNORD67-201ENST00000390833 111 ntBASIC3.81□□□□□ -1.8
RTL9Q8NET4 MTND4LP20-201ENST00000402379 270 ntBASIC3.81□□□□□ -1.8
RTL9Q8NET4 ISCA1P2-201ENST00000438679 421 ntBASIC3.81□□□□□ -1.8
RTL9Q8NET4 AC117440.1-201ENST00000474107 571 ntBASIC3.81□□□□□ -1.8
RTL9Q8NET4 VN1R104P-201ENST00000505115 1009 ntBASIC3.81□□□□□ -1.8
RTL9Q8NET4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.81□□□□□ -1.8
RTL9Q8NET4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RTL9Q8NET4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.81□□□□□ -1.8
RTL9Q8NET4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.81□□□□□ -1.8
RTL9Q8NET4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTL9Q8NET4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.8□□□□□ -1.8
RTL9Q8NET4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.8□□□□□ -1.8
RTL9Q8NET4 FAR1P1-201ENST00000427163 934 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RTL9Q8NET4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.8□□□□□ -1.8
RTL9Q8NET4 AL135938.1-201ENST00000443141 297 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.8□□□□□ -1.8
RTL9Q8NET4 RNU7-170P-201ENST00000459303 61 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 PRDX3P4-201ENST00000470828 747 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 METTL15P1-201ENST00000481421 1045 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 OR2A20P-203ENST00000498397 1268 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 RNU1-143P-201ENST00000516296 146 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.8□□□□□ -1.8
RTL9Q8NET4 MIR3162-201ENST00000581818 82 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.8□□□□□ -1.8
RTL9Q8NET4 AC116312.1-201ENST00000606841 314 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 U1.23-201ENST00000610293 146 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 RNU1-68P-201ENST00000615382 146 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 U1.39-201ENST00000621562 146 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 AC000123.2-201ENST00000623124 461 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 AC091903.1-201ENST00000624322 454 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 AC096644.4-201ENST00000563417 2912 ntBASIC3.8□□□□□ -1.8
RTL9Q8NET4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTL9Q8NET4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.79□□□□□ -1.8
RTL9Q8NET4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.79□□□□□ -1.8
RTL9Q8NET4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.79□□□□□ -1.8
RTL9Q8NET4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.79□□□□□ -1.8
RTL9Q8NET4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.79□□□□□ -1.8
RTL9Q8NET4 KC877373.1-201ENST00000479066 408 ntBASIC3.79□□□□□ -1.8
RTL9Q8NET4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.79□□□□□ -1.8
RTL9Q8NET4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms