Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 OR4A2P-201ENST00000527276 913 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 OR4U1P-201ENST00000554958 912 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 MIR5685-201ENST00000579080 79 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 MIR4444-1-201ENST00000581696 74 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 MIR4444-2-201ENST00000584390 74 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AL391001.1-201ENST00000602747 715 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AC024220.1-201ENST00000603675 484 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AL049634.3-201ENST00000604968 457 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AC024060.1-201ENST00000607052 494 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AC090912.3-201ENST00000609775 533 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 CYCSP41-201ENST00000616920 296 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 MIR7151-201ENST00000617477 60 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 VN1R7P-201ENST00000619242 903 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AC104985.3-201ENST00000623479 597 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 AC116667.1-201ENST00000604855 2072 ntBASIC3.67□□□□□ -1.82
CCDC71Q8IV32 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC71Q8IV32 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AC111188.2-201ENST00000529697 1387 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 SNORA72.3-201ENST00000365074 132 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 MIR200C-201ENST00000384980 68 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 RNU6-584P-201ENST00000410350 95 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 MTND4P3-201ENST00000417829 541 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AC027644.1-201ENST00000419595 298 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 OR5BE1P-201ENST00000425977 939 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AL691449.1-201ENST00000426570 421 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AC096992.1-201ENST00000459808 709 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 RPS4XP15-201ENST00000489210 795 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 UBE2V1P12-201ENST00000503954 474 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AC091163.3-201ENST00000518269 1144 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 OR4C2P-201ENST00000530855 1064 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 BPTFP1-201ENST00000579209 492 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 MIR4512-201ENST00000583257 77 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AC107982.3-201ENST00000584957 985 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AC002487.1-201ENST00000604565 994 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 CR392039.5-201ENST00000623201 510 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 OR5BE1P-202ENST00000641168 1176 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 AC138393.1-206ENST00000540997 1886 ntBASIC3.66□□□□□ -1.82
CCDC71Q8IV32 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CCDC71Q8IV32 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CCDC71Q8IV32 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CCDC71Q8IV32 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC71Q8IV32 SGO1P1-201ENST00000603525 1447 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC71Q8IV32 MIR423-201ENST00000362201 94 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC71Q8IV32 MTCO1P56-201ENST00000401674 224 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 AL590704.1-201ENST00000402856 794 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC71Q8IV32 ZNF602P-201ENST00000405929 924 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 HNRNPDP2-201ENST00000406475 478 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 RPL21P109-201ENST00000422213 475 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC71Q8IV32 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC71Q8IV32 AC234064.1-201ENST00000436312 247 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 AC004854.1-201ENST00000440356 349 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 MTCO1P53-201ENST00000441633 699 ntBASIC3.65□□□□□ -1.83
CCDC71Q8IV32 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms