Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AL117339.2-201ENST00000430475 180 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 MTCYBP15-201ENST00000433123 1127 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 RANP8-201ENST00000444720 713 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 HSFY6P-201ENST00000445573 403 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 PPIAP15-201ENST00000479662 484 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 PRELID3BP5-201ENST00000508612 460 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 MTCYBP41-201ENST00000528913 1123 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AP003385.6-201ENST00000531603 374 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC087894.1-201ENST00000538359 518 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC092747.2-201ENST00000545069 983 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC007224.1-201ENST00000564410 144 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 RPAP2P1-201ENST00000603626 1168 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AL354976.1-201ENST00000613843 387 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 MIR6500-201ENST00000622700 86 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC091905.1-201ENST00000624400 311 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 AC244205.2-202ENST00000635781 342 ntBASIC3.52□□□□□ -1.85
NIPAL3Q6P499 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NIPAL3Q6P499 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 GABPAP-201ENST00000419271 1356 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 RNU6-263P-201ENST00000363811 107 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 RN7SKP227-201ENST00000364445 330 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 RNA5SP283-201ENST00000365604 119 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AL139098.1-201ENST00000407291 389 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 RPS7P2-201ENST00000435134 607 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AP000949.1-201ENST00000438328 629 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 RPL31P13-201ENST00000484151 370 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AP001086.1-201ENST00000494882 321 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 HMGN1P15-201ENST00000513870 295 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AC087369.1-201ENST00000520775 996 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 MTND1P36-201ENST00000522384 936 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AL592436.1-201ENST00000605135 558 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 BRDTP1-201ENST00000605735 677 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AC006249.1-201ENST00000621223 471 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.51□□□□□ -1.85
NIPAL3Q6P499 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.51□□□□□ -1.85
NIPAL3Q6P499 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
NIPAL3Q6P499 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NIPAL3Q6P499 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.5□□□□□ -1.85
NIPAL3Q6P499 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NIPAL3Q6P499 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NIPAL3Q6P499 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
NIPAL3Q6P499 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms