Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDH1Q08174 DHX40P1-201ENST00000588725 1412 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDH1Q08174 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDH1Q08174 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDH1Q08174 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDH1Q08174 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDH1Q08174 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDH1Q08174 Y_RNA.133-201ENST00000363428 110 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 RNU5A-8P-201ENST00000364102 114 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 SNORA22B-201ENST00000383876 138 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 RNU6-1013P-201ENST00000384180 107 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 MIR558-201ENST00000384920 94 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCDH1Q08174 AL606923.1-201ENST00000406616 190 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDH1Q08174 RPSAP35-201ENST00000413753 818 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 METTL15P3-201ENST00000415522 1221 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AC234779.1-201ENST00000425910 285 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 COX6CP15-201ENST00000426313 211 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 RPS29P15-201ENST00000458329 171 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 RNU7-152P-201ENST00000458982 64 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 RN7SL284P-201ENST00000498823 275 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDH1Q08174 SNORA70.11-201ENST00000515987 138 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 SNORA70.13-201ENST00000516116 138 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDH1Q08174 AC011979.2-201ENST00000527568 352 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AP005435.4-201ENST00000529514 284 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AC103843.2-201ENST00000530523 682 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 TOMM20P1-201ENST00000534518 427 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDH1Q08174 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDH1Q08174 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDH1Q08174 AL163153.1-201ENST00000554223 283 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 DNAJC8P1-201ENST00000554535 372 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDH1Q08174 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.66□□□□□ -1.5
PCDH1Q08174 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDH1Q08174 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDH1Q08174 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDH1Q08174 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDH1Q08174 AC124312.5-201ENST00000604451 268 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AL022099.1-201ENST00000604551 712 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AL133481.2-203ENST00000607558 139 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AC010424.2-201ENST00000607594 443 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 MIR6793-201ENST00000612376 63 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 AL359757.2-201ENST00000624309 274 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
PCDH1Q08174 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDH1Q08174 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDH1Q08174 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.66□□□□□ -1.5
PCDH1Q08174 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDH1Q08174 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDH1Q08174 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDH1Q08174 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDH1Q08174 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDH1Q08174 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDH1Q08174 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCDH1Q08174 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDH1Q08174 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDH1Q08174 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDH1Q08174 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
PCDH1Q08174 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 AC004158.1-201ENST00000564508 4319 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 MFSD8-239ENST00000641590 2479 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 RNU6-552P-201ENST00000362869 119 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.65□□□□□ -1.5
PCDH1Q08174 Y_RNA.530-201ENST00000384587 101 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 RNU6-903P-201ENST00000391270 109 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 RPL11P3-201ENST00000395256 523 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 SNRPEP6-201ENST00000407465 277 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 RNA5SP431-201ENST00000410312 120 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 RNU4-14P-201ENST00000410858 122 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 AL161631.1-201ENST00000417933 486 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 BX284632.2-201ENST00000421091 399 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 PSMA6P3-201ENST00000428242 164 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 AC007679.3-201ENST00000434035 414 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDH1Q08174 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDH1Q08174 AP001992.1-205ENST00000462248 379 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 AC023194.2-201ENST00000465398 406 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 RPL23AP11-201ENST00000475260 469 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 RPS17P15-201ENST00000475609 349 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH1Q08174 FTH1P21-201ENST00000512179 511 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDH1Q08174 AC093853.1-201ENST00000515689 483 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 RNU6-864P-201ENST00000516256 108 ntBASIC5.65□□□□□ -1.5
PCDH1Q08174 RNA5SP92-201ENST00000516437 110 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms