Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC128687.2-201ENST00000609657 566 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC092650.2-201ENST00000619984 902 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC120349.2-201ENST00000625002 298 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 AC091925.2-201ENST00000625059 256 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN1BQ07699 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC004925.1-201ENST00000624256 2706 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC106871.1-201ENST00000568324 3102 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 LINC00622-201ENST00000562811 1570 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 CDR1-202ENST00000625883 1485 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN1BQ07699 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SCN1BQ07699 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN1BQ07699 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN1BQ07699 AC021146.4-201ENST00000309229 279 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
SCN1BQ07699 SNRPEP3-201ENST00000338402 276 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 MIR423-201ENST00000362201 94 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 RNA5SP332-201ENST00000391063 115 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 RPS7P15-201ENST00000415804 584 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AC012065.2-201ENST00000421295 375 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 GLRXP1-201ENST00000423261 334 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 AL590762.4-201ENST00000425885 253 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 AL365396.1-201ENST00000430854 671 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 RPEP2-201ENST00000432149 701 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 ATP5HP2-201ENST00000433885 485 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN1BQ07699 RPL23AP89-201ENST00000439324 255 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 RPL23AP76-201ENST00000441860 458 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AL662791.1-201ENST00000441992 928 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN1BQ07699 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 RPL39P6-201ENST00000448289 150 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AL445669.2-201ENST00000454425 421 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 HMGN2P7-201ENST00000456186 273 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 RPL12P20-201ENST00000475538 479 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 RPL32P9-201ENST00000487963 407 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AC011005.3-201ENST00000491624 395 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN1BQ07699 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.79□□□□□ -1.8
SCN1BQ07699 AP001636.2-201ENST00000525517 696 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
SCN1BQ07699 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.79□□□□□ -1.8
SCN1BQ07699 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN1BQ07699 AC091515.1-201ENST00000548110 679 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.79□□□□□ -1.8
SCN1BQ07699 AC012182.1-201ENST00000570133 895 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 MIR4509-3-201ENST00000578671 94 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 MIR4509-2-201ENST00000583920 94 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 MIR4737-201ENST00000583979 81 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN1BQ07699 BNIP3P24-201ENST00000593398 557 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN1BQ07699 BNIP3P39-201ENST00000601077 554 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 AC092953.2-201ENST00000608000 699 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN1BQ07699 AL157392.4-201ENST00000609756 345 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN1BQ07699 MIR4509-1-201ENST00000618224 94 ntBASIC3.79□□□□□ -1.8
SCN1BQ07699 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN1BQ07699 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN1BQ07699 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN1BQ07699 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.79□□□□□ -1.8
SCN1BQ07699 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN1BQ07699 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
SCN1BQ07699 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN1BQ07699 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN1BQ07699 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN1BQ07699 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SCN1BQ07699 AL049780.3-201ENST00000624612 1583 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SCN1BQ07699 NACA3P-201ENST00000359690 648 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN1BQ07699 RNU2-15P-201ENST00000410692 191 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AL161631.1-201ENST00000417933 486 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN1BQ07699 OR10R1P-201ENST00000441524 1141 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms