Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RN7SKP83-201ENST00000516512 178 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.11□□□□□ -1.75
GABPAQ06546 AP000926.4-201ENST00000527351 454 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GABPAQ06546 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.11□□□□□ -1.75
GABPAQ06546 AC124283.4-201ENST00000581815 456 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 NF1P5-201ENST00000588287 448 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GABPAQ06546 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.11□□□□□ -1.75
GABPAQ06546 AC005014.3-201ENST00000605985 190 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 AC017076.1-201ENST00000607613 578 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 MIR486-1-201ENST00000612171 68 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 AC018926.1-201ENST00000616335 435 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 AC068880.4-201ENST00000623082 495 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 AP003072.4-201ENST00000624580 310 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.11□□□□□ -1.75
GABPAQ06546 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 AL136520.1-201ENST00000600311 1322 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
GABPAQ06546 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GABPAQ06546 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GABPAQ06546 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GABPAQ06546 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.1□□□□□ -1.75
GABPAQ06546 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
GABPAQ06546 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.1□□□□□ -1.75
GABPAQ06546 AL645937.1-201ENST00000641739 1652 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GABPAQ06546 Z73965.1-201ENST00000623412 2297 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 AL118496.1-201ENST00000440201 1812 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 NCAPGP1-201ENST00000505112 1814 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
GABPAQ06546 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.1□□□□□ -1.75
GABPAQ06546 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.1□□□□□ -1.75
GABPAQ06546 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
GABPAQ06546 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GABPAQ06546 RNA5SP120-201ENST00000410900 112 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.1□□□□□ -1.75
GABPAQ06546 AC017083.1-201ENST00000428093 483 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 AC092170.1-201ENST00000440211 356 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.1□□□□□ -1.75
GABPAQ06546 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.1□□□□□ -1.75
GABPAQ06546 AL096829.2-201ENST00000446582 742 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.1□□□□□ -1.75
GABPAQ06546 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.1□□□□□ -1.75
GABPAQ06546 AC011037.1-201ENST00000483964 558 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.1□□□□□ -1.75
GABPAQ06546 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.1□□□□□ -1.75
GABPAQ06546 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.1□□□□□ -1.75
GABPAQ06546 RNU5A-7P-201ENST00000515979 116 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 RN7SKP283-201ENST00000517197 270 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.1□□□□□ -1.75
GABPAQ06546 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.1□□□□□ -1.75
GABPAQ06546 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.1□□□□□ -1.75
GABPAQ06546 AL360157.1-201ENST00000565962 87 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.1□□□□□ -1.75
GABPAQ06546 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.1□□□□□ -1.75
GABPAQ06546 MIR5195-201ENST00000583555 115 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.1□□□□□ -1.75
GABPAQ06546 AC078880.5-201ENST00000617845 421 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 AL109620.1-201ENST00000618738 1197 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.1□□□□□ -1.75
GABPAQ06546 MIR6715B-201ENST00000637172 77 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GABPAQ06546 AC018529.3-201ENST00000624212 2254 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 OTUD4P1-201ENST00000237841 3067 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GABPAQ06546 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GABPAQ06546 AC134882.1-201ENST00000603738 1676 ntBASIC4.1□□□□□ -1.75
GABPAQ06546 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.09□□□□□ -1.75
GABPAQ06546 AL049555.1-201ENST00000562834 1933 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 AL133383.2-201ENST00000622958 2336 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.09□□□□□ -1.75
GABPAQ06546 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.09□□□□□ -1.75
GABPAQ06546 RNU1-18P-201ENST00000363062 164 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
GABPAQ06546 RNU6-354P-201ENST00000383862 107 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 RNU6-610P-201ENST00000384264 107 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
GABPAQ06546 AC069282.1-201ENST00000411911 526 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.09□□□□□ -1.75
GABPAQ06546 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.09□□□□□ -1.75
GABPAQ06546 GXYLT1P1-201ENST00000446657 490 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.09□□□□□ -1.75
GABPAQ06546 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GABPAQ06546 BX510359.1-201ENST00000456973 237 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GABPAQ06546 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.09□□□□□ -1.75
GABPAQ06546 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.09□□□□□ -1.75
GABPAQ06546 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.09□□□□□ -1.75
GABPAQ06546 VWA8P1-201ENST00000510889 176 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 AP003355.1-201ENST00000518956 587 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 AC026333.2-201ENST00000542164 106 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 AC011611.5-201ENST00000552477 578 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 MIR4716-201ENST00000579628 84 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 RN7SL622P-201ENST00000585292 275 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.09□□□□□ -1.75
GABPAQ06546 YPEL5P2-201ENST00000605553 359 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.09□□□□□ -1.75
GABPAQ06546 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.09□□□□□ -1.75
GABPAQ06546 AP003400.6-201ENST00000624698 740 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms