Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLRN1P58418 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLRN1P58418 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLRN1P58418 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLRN1P58418 MTND5P28-201ENST00000438005 1594 ntBASIC4.61□□□□□ -1.67
CLRN1P58418 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLRN1P58418 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CLRN1P58418 AC011493.1-201ENST00000596753 1632 ntBASIC4.61□□□□□ -1.67
CLRN1P58418 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLRN1P58418 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CLRN1P58418 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 U3.3-201ENST00000362986 216 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 RNU6-797P-201ENST00000363101 109 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.6□□□□□ -1.67
CLRN1P58418 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CLRN1P58418 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.6□□□□□ -1.67
CLRN1P58418 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.6□□□□□ -1.67
CLRN1P58418 CHEK2P5-201ENST00000423877 246 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 MTCO1P20-201ENST00000425366 358 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.6□□□□□ -1.67
CLRN1P58418 MTCYBP45-201ENST00000435243 565 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.6□□□□□ -1.67
CLRN1P58418 CYCSP24-201ENST00000445119 316 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC239809.1-201ENST00000450470 217 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.6□□□□□ -1.67
CLRN1P58418 APOOP2-201ENST00000461561 539 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 PLGLA-201ENST00000465668 449 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC023598.1-201ENST00000472521 361 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 RPS4XP1-201ENST00000482189 787 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC041039.1-201ENST00000485656 536 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC034222.1-201ENST00000494052 532 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 RN7SL101P-201ENST00000496350 279 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 NIFKP7-201ENST00000503365 834 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC114967.1-201ENST00000504890 259 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC097173.1-201ENST00000505862 819 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.6□□□□□ -1.67
CLRN1P58418 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.6□□□□□ -1.67
CLRN1P58418 RNU6-201P-201ENST00000517100 61 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 FTH1P11-201ENST00000517577 551 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AP001646.1-201ENST00000527936 915 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC109635.3-201ENST00000529536 185 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 AL845331.3-202ENST00000562856 261 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.6□□□□□ -1.67
CLRN1P58418 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 AC107954.1-201ENST00000565906 727 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.6□□□□□ -1.67
CLRN1P58418 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.6□□□□□ -1.67
CLRN1P58418 AC006272.2-201ENST00000594725 163 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.6□□□□□ -1.67
CLRN1P58418 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 AL390208.1-201ENST00000605885 644 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AC008536.2-201ENST00000607284 349 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AL161734.1-201ENST00000609720 557 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.6□□□□□ -1.67
CLRN1P58418 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 AC010149.2-201ENST00000637608 315 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CLRN1P58418 ERCC6-202ENST00000374127 1782 ntBASIC4.6□□□□□ -1.67
CLRN1P58418 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.6□□□□□ -1.67
CLRN1P58418 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLRN1P58418 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLRN1P58418 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLRN1P58418 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLRN1P58418 RNU6-1243P-201ENST00000364028 107 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLRN1P58418 RNU6-730P-201ENST00000383954 104 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 Y_RNA.573-201ENST00000384763 105 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.59□□□□□ -1.67
CLRN1P58418 HSPD1P16-201ENST00000402302 394 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 RPL31P52-201ENST00000407532 367 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.59□□□□□ -1.67
CLRN1P58418 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLRN1P58418 RPL36AP36-201ENST00000418616 301 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 SLC35E1P1-201ENST00000419313 864 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.59□□□□□ -1.67
CLRN1P58418 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.59□□□□□ -1.67
CLRN1P58418 AC104837.2-201ENST00000427236 424 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.59□□□□□ -1.67
CLRN1P58418 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.59□□□□□ -1.67
CLRN1P58418 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.59□□□□□ -1.67
CLRN1P58418 AC009238.2-201ENST00000431026 355 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 MTCO2P11-201ENST00000431069 680 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AC104850.1-201ENST00000435940 476 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CLRN1P58418 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.59□□□□□ -1.67
CLRN1P58418 AC105402.2-201ENST00000438503 358 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.59□□□□□ -1.67
CLRN1P58418 CBX1P1-201ENST00000440184 427 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.59□□□□□ -1.67
CLRN1P58418 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLRN1P58418 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.59□□□□□ -1.67
CLRN1P58418 RPS20P32-201ENST00000456044 356 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms