Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 OR5AP1P-201ENST00000529730 940 ntBASIC3.35□□□□□ -1.87
VSX2P58304 AC093014.1-201ENST00000548926 724 ntBASIC3.35□□□□□ -1.87
VSX2P58304 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.35□□□□□ -1.87
VSX2P58304 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.35□□□□□ -1.87
VSX2P58304 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VSX2P58304 AC022146.1-201ENST00000595307 847 ntBASIC3.35□□□□□ -1.87
VSX2P58304 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.35□□□□□ -1.87
VSX2P58304 AL450270.1-201ENST00000606160 391 ntBASIC3.35□□□□□ -1.87
VSX2P58304 AC100814.1-201ENST00000606963 623 ntBASIC3.35□□□□□ -1.87
VSX2P58304 AC015967.1-201ENST00000619893 476 ntBASIC3.35□□□□□ -1.87
VSX2P58304 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.35□□□□□ -1.87
VSX2P58304 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VSX2P58304 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.35□□□□□ -1.87
VSX2P58304 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VSX2P58304 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VSX2P58304 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
VSX2P58304 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VSX2P58304 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VSX2P58304 AF127577.6-201ENST00000623352 2191 ntBASIC3.34□□□□□ -1.87
VSX2P58304 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
VSX2P58304 RNU4-35P-201ENST00000362588 141 ntBASIC3.34□□□□□ -1.87
VSX2P58304 RNU6-283P-201ENST00000364788 107 ntBASIC3.34□□□□□ -1.87
VSX2P58304 RNA5SP235-201ENST00000365411 114 ntBASIC3.34□□□□□ -1.87
VSX2P58304 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
VSX2P58304 MIR490-201ENST00000384865 128 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.34□□□□□ -1.87
VSX2P58304 AL391417.1-201ENST00000404100 426 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AL590290.1-201ENST00000405336 380 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC007390.1-201ENST00000415722 356 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC234782.4-201ENST00000417646 1048 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC114814.2-201ENST00000419195 485 ntBASIC3.34□□□□□ -1.87
VSX2P58304 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.34□□□□□ -1.87
VSX2P58304 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.34□□□□□ -1.87
VSX2P58304 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.34□□□□□ -1.87
VSX2P58304 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.34□□□□□ -1.87
VSX2P58304 AC105402.2-201ENST00000438503 358 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC074367.1-201ENST00000438685 1125 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.34□□□□□ -1.87
VSX2P58304 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.34□□□□□ -1.87
VSX2P58304 RPL26P28-201ENST00000451325 435 ntBASIC3.34□□□□□ -1.87
VSX2P58304 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AL035404.1-201ENST00000497982 568 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.34□□□□□ -1.87
VSX2P58304 MTCO1P30-201ENST00000515244 580 ntBASIC3.34□□□□□ -1.87
VSX2P58304 CIR1P1-201ENST00000524055 1133 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.34□□□□□ -1.87
VSX2P58304 PDCL2P2-201ENST00000533651 189 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC007458.1-201ENST00000542812 373 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC025260.1-201ENST00000548858 430 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.34□□□□□ -1.87
VSX2P58304 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.34□□□□□ -1.87
VSX2P58304 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.34□□□□□ -1.87
VSX2P58304 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.34□□□□□ -1.87
VSX2P58304 RN7SL339P-201ENST00000580597 296 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.34□□□□□ -1.87
VSX2P58304 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.34□□□□□ -1.87
VSX2P58304 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.34□□□□□ -1.87
VSX2P58304 AL365503.1-201ENST00000605247 905 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC135178.6-201ENST00000605314 398 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AL118508.4-201ENST00000624142 1176 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.34□□□□□ -1.87
VSX2P58304 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VSX2P58304 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.87
VSX2P58304 DCAF13P3-201ENST00000561147 1334 ntBASIC3.34□□□□□ -1.87
VSX2P58304 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
VSX2P58304 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
VSX2P58304 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
VSX2P58304 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
VSX2P58304 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
VSX2P58304 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
VSX2P58304 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.33□□□□□ -1.88
VSX2P58304 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
VSX2P58304 Y_RNA.333-201ENST00000365274 102 ntBASIC3.33□□□□□ -1.88
VSX2P58304 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VSX2P58304 RNU6-883P-201ENST00000384597 107 ntBASIC3.33□□□□□ -1.88
VSX2P58304 NPM1P10-201ENST00000398310 865 ntBASIC3.33□□□□□ -1.88
VSX2P58304 MTCO3P31-201ENST00000405526 789 ntBASIC3.33□□□□□ -1.88
VSX2P58304 RNU2-37P-201ENST00000410695 177 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AC004987.3-201ENST00000413879 771 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AL031736.2-201ENST00000426573 787 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.33□□□□□ -1.88
VSX2P58304 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.33□□□□□ -1.88
VSX2P58304 RPL7P29-201ENST00000437151 728 ntBASIC3.33□□□□□ -1.88
VSX2P58304 CYCSP43-201ENST00000438233 310 ntBASIC3.33□□□□□ -1.88
VSX2P58304 MTCO3P43-201ENST00000440974 771 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AC069540.1-201ENST00000446320 988 ntBASIC3.33□□□□□ -1.88
VSX2P58304 RPL37P6-202ENST00000464216 403 ntBASIC3.33□□□□□ -1.88
VSX2P58304 CABYRP1-201ENST00000465493 1045 ntBASIC3.33□□□□□ -1.88
VSX2P58304 RN7SL594P-201ENST00000470590 287 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AC108729.2-201ENST00000476543 840 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AC093663.2-201ENST00000484625 313 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AC090071.1-201ENST00000507713 644 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.33□□□□□ -1.88
VSX2P58304 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.33□□□□□ -1.88
VSX2P58304 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.33□□□□□ -1.88
VSX2P58304 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.33□□□□□ -1.88
VSX2P58304 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.33□□□□□ -1.88
VSX2P58304 AC026616.1-201ENST00000523157 525 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VSX2P58304 OR4A2P-201ENST00000527276 913 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms